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Iron in PDB 2fc2: No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation.

Enzymatic activity of No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation.

All present enzymatic activity of No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation.:
1.14.13.39;

Protein crystallography data

The structure of No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation., PDB code: 2fc2 was solved by K.Pant, B.R.Crane, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.02 / 2.20
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 82.738, 96.175, 129.547, 90.00, 90.00, 90.00
R / Rfree (%) 27.3 / 27.4

Iron Binding Sites:

The binding sites of Iron atom in the No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation. (pdb code 2fc2). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation., PDB code: 2fc2:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 2fc2

Go back to Iron Binding Sites List in 2fc2
Iron binding site 1 out of 2 in the No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe901

b:28.6
occ:1.00
FE A:HEM901 0.0 28.6 1.0
N A:NO1901 1.7 50.1 1.0
NA A:HEM901 2.0 28.4 1.0
NC A:HEM901 2.0 25.0 1.0
NB A:HEM901 2.0 33.5 1.0
ND A:HEM901 2.0 25.1 1.0
SG A:CYS62 2.4 46.5 1.0
O A:NO1901 2.8 48.7 1.0
C4C A:HEM901 3.0 25.6 1.0
C1B A:HEM901 3.0 26.3 1.0
C4D A:HEM901 3.0 24.0 1.0
C1A A:HEM901 3.0 31.6 1.0
C4A A:HEM901 3.0 32.9 1.0
C4B A:HEM901 3.0 28.4 1.0
C1C A:HEM901 3.0 26.5 1.0
C1D A:HEM901 3.1 24.9 1.0
CHC A:HEM901 3.4 25.8 1.0
CHB A:HEM901 3.4 24.3 1.0
CHD A:HEM901 3.4 22.6 1.0
CHA A:HEM901 3.4 25.7 1.0
CB A:CYS62 3.5 46.5 1.0
C2C A:HEM901 4.2 26.5 1.0
C3C A:HEM901 4.2 27.3 1.0
C2B A:HEM901 4.3 28.9 1.0
C3A A:HEM901 4.3 30.2 1.0
C3B A:HEM901 4.3 29.5 1.0
C2A A:HEM901 4.3 34.5 1.0
C3D A:HEM901 4.3 25.7 1.0
NH1 A:HAR909 4.3 49.2 1.0
C2D A:HEM901 4.3 27.6 1.0
CA A:CYS62 4.4 46.6 1.0
NE1 A:TRP56 4.7 44.5 1.0
OH1 A:HAR909 4.7 50.8 1.0
CZ A:HAR909 4.9 43.6 1.0

Iron binding site 2 out of 2 in 2fc2

Go back to Iron Binding Sites List in 2fc2
Iron binding site 2 out of 2 in the No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of No-Heme Complex in A Bacterial Nitric Oxide Synthase. An Fe(III)-No May Cause Nitrosation. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe902

b:39.2
occ:1.00
FE B:HEM902 0.0 39.2 1.0
NB B:HEM902 2.0 43.5 1.0
NC B:HEM902 2.0 42.9 1.0
NA B:HEM902 2.0 42.5 1.0
ND B:HEM902 2.1 42.4 1.0
N B:NO1902 2.3 42.4 1.0
SG B:CYS62 2.6 51.2 1.0
O B:NO1902 2.8 47.2 1.0
C1A B:HEM902 3.0 36.4 1.0
C4C B:HEM902 3.0 41.6 1.0
C4D B:HEM902 3.1 43.3 1.0
C1C B:HEM902 3.1 42.5 1.0
C1D B:HEM902 3.1 42.3 1.0
C4B B:HEM902 3.1 36.7 1.0
C1B B:HEM902 3.1 37.5 1.0
C4A B:HEM902 3.1 43.4 1.0
CHA B:HEM902 3.3 37.0 1.0
CHD B:HEM902 3.4 33.8 1.0
CHC B:HEM902 3.5 34.1 1.0
CB B:CYS62 3.5 51.0 1.0
CHB B:HEM902 3.5 32.3 1.0
NH1 A:HAR910 3.9 52.9 1.0
C2A B:HEM902 4.2 43.9 1.0
C3C B:HEM902 4.3 45.0 1.0
C2C B:HEM902 4.3 43.2 1.0
C3A B:HEM902 4.3 45.7 1.0
C2D B:HEM902 4.3 44.3 1.0
C3D B:HEM902 4.4 42.5 1.0
C2B B:HEM902 4.4 40.4 1.0
C3B B:HEM902 4.4 41.7 1.0
CA B:CYS62 4.5 50.9 1.0
OH1 A:HAR910 4.5 51.1 1.0
CZ A:HAR910 4.6 53.6 1.0
NE1 B:TRP56 4.7 53.5 1.0
NE A:HAR910 4.9 53.0 1.0

Reference:

K.Pant, B.R.Crane. Nitrosyl-Heme Structures of Bacillus Subtilis Nitric Oxide Synthase Have Implications For Understanding Substrate Oxidation. Biochemistry V. 45 2537 2006.
ISSN: ISSN 0006-2960
PubMed: 16489746
DOI: 10.1021/BI0518848
Page generated: Sun Dec 13 14:43:56 2020

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