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Iron in PDB 2frf: Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak

Protein crystallography data

The structure of Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak, PDB code: 2frf was solved by D.M.Copeland, A.S.Soares, A.H.West, G.B.Richter-Addo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.94 / 1.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 35.240, 28.607, 62.938, 90.00, 105.75, 90.00
R / Rfree (%) 16.8 / 21.1

Iron Binding Sites:

The binding sites of Iron atom in the Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak (pdb code 2frf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak, PDB code: 2frf:

Iron binding site 1 out of 1 in 2frf

Go back to Iron Binding Sites List in 2frf
Iron binding site 1 out of 1 in the Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Horse Heart Myoglobin, Nitrite Adduct, Crystal Soak within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:8.8
occ:1.00
FE A:HEM154 0.0 8.8 1.0
O2 A:NO2159 1.9 10.5 1.0
NC A:HEM154 2.0 8.5 1.0
NB A:HEM154 2.0 8.7 1.0
NA A:HEM154 2.0 8.2 1.0
ND A:HEM154 2.0 9.4 1.0
NE2 A:HIS93 2.1 8.6 1.0
N A:NO2159 2.8 14.4 1.0
C4C A:HEM154 3.0 9.1 1.0
C1D A:HEM154 3.0 9.4 1.0
C1C A:HEM154 3.0 8.8 1.0
CE1 A:HIS93 3.0 10.4 1.0
C4A A:HEM154 3.0 8.8 1.0
C1B A:HEM154 3.0 9.0 1.0
C4B A:HEM154 3.0 9.3 1.0
C1A A:HEM154 3.1 10.2 1.0
CD2 A:HIS93 3.1 9.4 1.0
C4D A:HEM154 3.1 9.6 1.0
CHD A:HEM154 3.4 10.3 1.0
CHB A:HEM154 3.4 9.6 1.0
CHC A:HEM154 3.4 9.8 1.0
CHA A:HEM154 3.5 9.4 1.0
O1 A:NO2159 4.0 17.5 1.0
ND1 A:HIS93 4.2 10.2 1.0
CG A:HIS93 4.2 9.2 1.0
C3C A:HEM154 4.2 9.9 1.0
C2C A:HEM154 4.3 9.3 1.0
C2B A:HEM154 4.3 8.8 1.0
C3B A:HEM154 4.3 9.9 1.0
C2D A:HEM154 4.3 10.9 1.0
C3A A:HEM154 4.3 9.6 1.0
C2A A:HEM154 4.3 8.8 1.0
C3D A:HEM154 4.3 12.2 1.0
NE2 A:HIS64 4.4 12.2 1.0
CG2 A:VAL68 4.7 12.2 1.0
CE1 A:HIS64 5.0 12.4 1.0

Reference:

D.M.Copeland, A.S.Soares, A.H.West, G.B.Richter-Addo. Crystal Structures of the Nitrite and Nitric Oxide Complexes of Horse Heart Myoglobin. J.Inorg.Biochem. V. 100 1413 2006.
ISSN: ISSN 0162-0134
PubMed: 16777231
DOI: 10.1016/J.JINORGBIO.2006.04.011
Page generated: Sat Aug 3 21:40:32 2024

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