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Iron in PDB 2gnu: The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route

Protein crystallography data

The structure of The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route, PDB code: 2gnu was solved by P.Wadsten, A.B.Woehri, A.Snijder, G.Katona, A.T.Gardiner, R.J.Cogdell, R.Neutze, S.Engstroem, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.80 / 2.20
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 100.422, 100.422, 235.412, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 24.6

Other elements in 2gnu:

The structure of The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route (pdb code 2gnu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route, PDB code: 2gnu:

Iron binding site 1 out of 1 in 2gnu

Go back to Iron Binding Sites List in 2gnu
Iron binding site 1 out of 1 in the The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Crystallization of Reaction Center From Rhodobacter Sphaeroides Occurs Via A New Route within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe1307

b:14.1
occ:1.00
OE1 M:GLU234 2.1 13.7 1.0
NE2 L:HIS190 2.1 9.9 1.0
NE2 M:HIS219 2.2 9.1 1.0
NE2 M:HIS266 2.3 8.8 1.0
NE2 L:HIS230 2.3 8.7 1.0
OE2 M:GLU234 2.4 12.1 1.0
CD M:GLU234 2.6 12.7 1.0
CE1 L:HIS190 3.0 6.2 1.0
CE1 M:HIS219 3.1 11.7 1.0
CE1 M:HIS266 3.2 12.9 1.0
CD2 L:HIS190 3.3 10.2 1.0
CE1 L:HIS230 3.3 11.7 1.0
CD2 M:HIS266 3.3 11.0 1.0
CD2 M:HIS219 3.3 13.4 1.0
CD2 L:HIS230 3.4 5.9 1.0
CG M:GLU234 4.1 9.6 1.0
ND1 L:HIS190 4.1 9.7 1.0
ND1 M:HIS219 4.3 10.2 1.0
CG L:HIS190 4.3 10.2 1.0
ND1 M:HIS266 4.4 14.3 1.0
CG M:HIS219 4.4 10.4 1.0
ND1 L:HIS230 4.4 8.2 1.0
CG M:HIS266 4.4 10.1 1.0
CG1 M:ILE223 4.5 11.1 1.0
CG L:HIS230 4.5 9.7 1.0
CG2 L:VAL194 4.6 8.2 1.0
O M:HOH1329 4.8 20.9 1.0
CB M:GLU234 4.9 11.7 1.0

Reference:

P.Wadsten, A.B.Woehri, A.Snijder, G.Katona, A.T.Gardiner, R.J.Cogdell, R.Neutze, S.Engstroem. Lipidic Sponge Phase Crystallization of Membrane Proteins J.Mol.Biol. V. 364 44 2006.
ISSN: ISSN 0022-2836
PubMed: 17005199
DOI: 10.1016/J.JMB.2006.06.043
Page generated: Sat Aug 3 22:36:10 2024

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