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Iron in PDB 2hbc: High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes

Protein crystallography data

The structure of High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes, PDB code: 2hbc was solved by K.A.Johnson, J.S.Olson, G.N.Phillips Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 5.00 / 2.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 54.050, 54.050, 193.800, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / n/a

Iron Binding Sites:

The binding sites of Iron atom in the High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes (pdb code 2hbc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes, PDB code: 2hbc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 2hbc

Go back to Iron Binding Sites List in 2hbc
Iron binding site 1 out of 2 in the High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe142

b:18.7
occ:1.00
FE A:HEM142 0.0 18.7 1.0
C A:ENC143 1.7 20.3 1.0
NA A:HEM142 1.9 22.0 1.0
ND A:HEM142 2.0 21.7 1.0
NC A:HEM142 2.0 20.7 1.0
NB A:HEM142 2.0 20.0 1.0
NE2 A:HIS87 2.1 21.1 1.0
N A:ENC143 2.7 20.0 1.0
CE1 A:HIS87 2.9 22.8 1.0
C1A A:HEM142 2.9 23.0 1.0
C4A A:HEM142 3.0 22.1 1.0
C4D A:HEM142 3.0 22.1 1.0
C1B A:HEM142 3.0 20.1 1.0
C1C A:HEM142 3.1 20.0 1.0
C4B A:HEM142 3.1 18.1 1.0
C4C A:HEM142 3.1 19.2 1.0
C1D A:HEM142 3.1 19.7 1.0
CD2 A:HIS87 3.1 21.8 1.0
CHA A:HEM142 3.3 22.8 1.0
CHB A:HEM142 3.4 19.7 1.0
CHC A:HEM142 3.4 18.4 1.0
CHD A:HEM142 3.5 18.2 1.0
C1 A:ENC143 3.8 21.0 1.0
C2 A:ENC143 4.1 21.4 1.0
ND1 A:HIS87 4.1 24.0 1.0
C2A A:HEM142 4.2 25.9 1.0
C3A A:HEM142 4.2 24.8 1.0
CG A:HIS87 4.2 24.7 1.0
C3D A:HEM142 4.3 21.5 1.0
C3C A:HEM142 4.3 16.8 1.0
C2C A:HEM142 4.3 16.6 1.0
C3B A:HEM142 4.3 18.3 1.0
NE2 A:HIS58 4.3 22.1 1.0
C2D A:HEM142 4.3 21.4 1.0
C2B A:HEM142 4.3 19.4 1.0
CG2 A:VAL62 5.0 16.2 1.0

Iron binding site 2 out of 2 in 2hbc

Go back to Iron Binding Sites List in 2hbc
Iron binding site 2 out of 2 in the High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of High Resolution X-Ray Structures of Myoglobin-and Hemoglobin-Alkyl Isocyanide Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:22.4
occ:1.00
FE B:HEM147 0.0 22.4 1.0
C B:ENC148 1.8 22.6 1.0
NB B:HEM147 1.9 21.3 1.0
NE2 B:HIS92 2.0 17.4 1.0
ND B:HEM147 2.0 24.1 1.0
NA B:HEM147 2.0 26.1 1.0
NC B:HEM147 2.0 23.5 1.0
N B:ENC148 2.5 28.2 1.0
CE1 B:HIS92 2.9 16.1 1.0
C4B B:HEM147 2.9 21.8 1.0
CD2 B:HIS92 3.0 16.9 1.0
C4D B:HEM147 3.0 24.8 1.0
C1B B:HEM147 3.0 22.1 1.0
C1A B:HEM147 3.0 26.6 1.0
C1D B:HEM147 3.1 24.9 1.0
C1C B:HEM147 3.1 21.0 1.0
C4C B:HEM147 3.1 22.8 1.0
C4A B:HEM147 3.1 26.6 1.0
CHC B:HEM147 3.4 19.8 1.0
CHA B:HEM147 3.4 21.6 1.0
CHB B:HEM147 3.5 24.5 1.0
CHD B:HEM147 3.5 22.0 1.0
C1 B:ENC148 3.6 29.6 1.0
ND1 B:HIS92 4.1 17.9 1.0
CG B:HIS92 4.1 20.2 1.0
C3B B:HEM147 4.1 23.8 1.0
C2B B:HEM147 4.2 23.0 1.0
C3D B:HEM147 4.2 27.2 1.0
C2D B:HEM147 4.3 26.1 1.0
C2A B:HEM147 4.3 27.8 1.0
C3A B:HEM147 4.3 27.3 1.0
C2C B:HEM147 4.4 20.9 1.0
C3C B:HEM147 4.4 22.9 1.0
NE2 B:HIS63 4.4 35.0 1.0
C2 B:ENC148 4.7 32.2 1.0
CG2 B:VAL67 4.9 36.2 1.0

Reference:

K.A.Johnson, K.A.Johnson, J.S.Olson, G.N.Phillips Jr.. N/A N/A.
Page generated: Sat Aug 3 22:52:24 2024

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