Iron in PDB 2hmz: The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
Protein crystallography data
The structure of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution, PDB code: 2hmz
was solved by
M.A.Holmes,
R.E.Stenkamp,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
10.00 /
1.66
|
|
Space group
|
P 4
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
86.600,
86.600,
80.800,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
n/a /
n/a
|
Iron Binding Sites:
The binding sites of Iron atom in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
(pdb code 2hmz). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution, PDB code: 2hmz:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 1 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe115
b:11.2
occ:1.00
|
FE1
|
A:FEA115
|
0.0
|
11.2
|
1.0
|
|
O
|
A:FEA115
|
1.9
|
9.9
|
1.0
|
|
OE1
|
A:GLU58
|
2.1
|
10.2
|
1.0
|
|
NE2
|
A:HIS77
|
2.2
|
8.8
|
1.0
|
|
OD1
|
A:ASP106
|
2.2
|
9.6
|
1.0
|
|
NE2
|
A:HIS101
|
2.2
|
11.4
|
1.0
|
|
NE2
|
A:HIS73
|
2.3
|
10.3
|
1.0
|
|
CD
|
A:GLU58
|
3.0
|
7.3
|
1.0
|
|
CE1
|
A:HIS77
|
3.1
|
8.5
|
1.0
|
|
CD2
|
A:HIS101
|
3.1
|
10.6
|
1.0
|
|
CG
|
A:ASP106
|
3.2
|
8.6
|
1.0
|
|
CE1
|
A:HIS73
|
3.2
|
9.9
|
1.0
|
|
CD2
|
A:HIS77
|
3.2
|
9.7
|
1.0
|
|
FE2
|
A:FEA115
|
3.2
|
11.3
|
1.0
|
|
CE1
|
A:HIS101
|
3.3
|
10.7
|
1.0
|
|
CD2
|
A:HIS73
|
3.3
|
9.9
|
1.0
|
|
OE2
|
A:GLU58
|
3.3
|
7.9
|
1.0
|
|
OD2
|
A:ASP106
|
3.4
|
10.1
|
1.0
|
|
ND1
|
A:HIS77
|
4.2
|
9.8
|
1.0
|
|
CG
|
A:HIS101
|
4.3
|
10.7
|
1.0
|
|
CG
|
A:HIS77
|
4.3
|
8.4
|
1.0
|
|
ND1
|
A:HIS73
|
4.3
|
12.0
|
1.0
|
|
ND1
|
A:HIS101
|
4.4
|
10.9
|
1.0
|
|
CG
|
A:HIS73
|
4.4
|
12.0
|
1.0
|
|
CG
|
A:GLU58
|
4.4
|
7.6
|
1.0
|
|
NA
|
A:FEA115
|
4.5
|
7.8
|
1.0
|
|
NB
|
A:FEA115
|
4.5
|
10.9
|
1.0
|
|
NE2
|
A:HIS54
|
4.6
|
10.3
|
1.0
|
|
CB
|
A:ASP106
|
4.6
|
8.4
|
1.0
|
|
CE1
|
A:PHE55
|
4.7
|
9.3
|
1.0
|
|
CD1
|
A:PHE55
|
4.7
|
8.6
|
1.0
|
|
CE2
|
A:TYR109
|
4.8
|
8.2
|
1.0
|
|
NC
|
A:FEA115
|
4.8
|
17.2
|
1.0
|
|
CA
|
A:ASP106
|
4.9
|
10.2
|
1.0
|
|
CB
|
A:GLU58
|
4.9
|
8.1
|
1.0
|
|
N
|
A:ASP106
|
5.0
|
11.2
|
1.0
|
|
Iron binding site 2 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 2 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe115
b:11.3
occ:1.00
|
FE2
|
A:FEA115
|
0.0
|
11.3
|
1.0
|
|
O
|
A:FEA115
|
1.6
|
9.9
|
1.0
|
|
OD2
|
A:ASP106
|
2.1
|
10.1
|
1.0
|
|
NA
|
A:FEA115
|
2.1
|
7.8
|
1.0
|
|
NE2
|
A:HIS54
|
2.2
|
10.3
|
1.0
|
|
NE2
|
A:HIS25
|
2.2
|
11.8
|
1.0
|
|
OE2
|
A:GLU58
|
2.3
|
7.9
|
1.0
|
|
NB
|
A:FEA115
|
2.9
|
10.9
|
1.0
|
|
CG
|
A:ASP106
|
3.1
|
8.6
|
1.0
|
|
CD2
|
A:HIS25
|
3.1
|
9.3
|
1.0
|
|
CE1
|
A:HIS54
|
3.1
|
7.4
|
1.0
|
|
CD
|
A:GLU58
|
3.2
|
7.3
|
1.0
|
|
FE1
|
A:FEA115
|
3.2
|
11.2
|
1.0
|
|
CD2
|
A:HIS54
|
3.2
|
9.9
|
1.0
|
|
CE1
|
A:HIS25
|
3.3
|
9.9
|
1.0
|
|
OD1
|
A:ASP106
|
3.4
|
9.6
|
1.0
|
|
OE1
|
A:GLU58
|
3.5
|
10.2
|
1.0
|
|
NC
|
A:FEA115
|
3.9
|
17.2
|
1.0
|
|
CD2
|
A:HIS101
|
4.1
|
10.6
|
1.0
|
|
CG
|
A:HIS25
|
4.3
|
9.4
|
1.0
|
|
ND1
|
A:HIS54
|
4.3
|
8.1
|
1.0
|
|
NE2
|
A:HIS101
|
4.3
|
11.4
|
1.0
|
|
CG
|
A:HIS54
|
4.3
|
5.8
|
1.0
|
|
ND1
|
A:HIS25
|
4.4
|
11.4
|
1.0
|
|
CB
|
A:ASP106
|
4.4
|
8.4
|
1.0
|
|
OH
|
A:TYR109
|
4.5
|
12.5
|
1.0
|
|
CG
|
A:GLU58
|
4.5
|
7.6
|
1.0
|
|
CG1
|
A:ILE102
|
4.6
|
8.8
|
1.0
|
|
NE2
|
A:HIS77
|
4.7
|
8.8
|
1.0
|
|
CE1
|
A:PHE55
|
4.9
|
9.3
|
1.0
|
|
CB
|
A:GLU58
|
5.0
|
8.1
|
1.0
|
|
Iron binding site 3 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 3 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe115
b:15.1
occ:1.00
|
FE1
|
B:FEA115
|
0.0
|
15.1
|
1.0
|
|
O
|
B:FEA115
|
1.9
|
11.8
|
1.0
|
|
NE2
|
B:HIS77
|
2.2
|
10.8
|
1.0
|
|
OD1
|
B:ASP106
|
2.2
|
13.3
|
1.0
|
|
OE1
|
B:GLU58
|
2.2
|
15.2
|
1.0
|
|
NE2
|
B:HIS101
|
2.2
|
11.4
|
1.0
|
|
NE2
|
B:HIS73
|
2.3
|
11.8
|
1.0
|
|
CD2
|
B:HIS101
|
3.1
|
13.3
|
1.0
|
|
CD
|
B:GLU58
|
3.1
|
11.7
|
1.0
|
|
CE1
|
B:HIS77
|
3.1
|
9.8
|
1.0
|
|
CG
|
B:ASP106
|
3.2
|
12.7
|
1.0
|
|
FE2
|
B:FEA115
|
3.2
|
14.7
|
1.0
|
|
CD2
|
B:HIS77
|
3.2
|
10.1
|
1.0
|
|
CD2
|
B:HIS73
|
3.3
|
9.8
|
1.0
|
|
CE1
|
B:HIS101
|
3.3
|
14.2
|
1.0
|
|
CE1
|
B:HIS73
|
3.3
|
13.7
|
1.0
|
|
OE2
|
B:GLU58
|
3.3
|
12.0
|
1.0
|
|
OD2
|
B:ASP106
|
3.4
|
14.1
|
1.0
|
|
ND1
|
B:HIS77
|
4.2
|
11.7
|
1.0
|
|
CG
|
B:HIS101
|
4.3
|
11.7
|
1.0
|
|
CG
|
B:HIS77
|
4.4
|
10.1
|
1.0
|
|
ND1
|
B:HIS101
|
4.4
|
11.2
|
1.0
|
|
NA
|
B:FEA115
|
4.4
|
15.2
|
1.0
|
|
ND1
|
B:HIS73
|
4.4
|
12.7
|
1.0
|
|
CG
|
B:HIS73
|
4.5
|
13.4
|
1.0
|
|
CG
|
B:GLU58
|
4.5
|
14.4
|
1.0
|
|
NE2
|
B:HIS54
|
4.5
|
11.8
|
1.0
|
|
CB
|
B:ASP106
|
4.5
|
12.8
|
1.0
|
|
NB
|
B:FEA115
|
4.6
|
16.4
|
1.0
|
|
CE1
|
B:PHE55
|
4.6
|
15.8
|
1.0
|
|
CD1
|
B:PHE55
|
4.7
|
12.1
|
1.0
|
|
NC
|
B:FEA115
|
4.8
|
16.2
|
1.0
|
|
CA
|
B:ASP106
|
4.9
|
13.5
|
1.0
|
|
CE2
|
B:TYR109
|
4.9
|
13.8
|
1.0
|
|
CB
|
B:GLU58
|
4.9
|
11.2
|
1.0
|
|
Iron binding site 4 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 4 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe115
b:14.7
occ:1.00
|
FE2
|
B:FEA115
|
0.0
|
14.7
|
1.0
|
|
O
|
B:FEA115
|
1.7
|
11.8
|
1.0
|
|
NA
|
B:FEA115
|
2.1
|
15.2
|
1.0
|
|
OD2
|
B:ASP106
|
2.1
|
14.1
|
1.0
|
|
NE2
|
B:HIS25
|
2.2
|
11.7
|
1.0
|
|
NE2
|
B:HIS54
|
2.2
|
11.8
|
1.0
|
|
OE2
|
B:GLU58
|
2.4
|
12.0
|
1.0
|
|
NB
|
B:FEA115
|
2.9
|
16.4
|
1.0
|
|
CG
|
B:ASP106
|
3.1
|
12.7
|
1.0
|
|
CD2
|
B:HIS25
|
3.2
|
7.0
|
1.0
|
|
CE1
|
B:HIS54
|
3.2
|
14.6
|
1.0
|
|
CD
|
B:GLU58
|
3.2
|
11.7
|
1.0
|
|
FE1
|
B:FEA115
|
3.2
|
15.1
|
1.0
|
|
CD2
|
B:HIS54
|
3.2
|
11.5
|
1.0
|
|
CE1
|
B:HIS25
|
3.2
|
10.1
|
1.0
|
|
OD1
|
B:ASP106
|
3.3
|
13.3
|
1.0
|
|
OE1
|
B:GLU58
|
3.5
|
15.2
|
1.0
|
|
NC
|
B:FEA115
|
3.9
|
16.2
|
1.0
|
|
CD2
|
B:HIS101
|
4.2
|
13.3
|
1.0
|
|
CG
|
B:HIS25
|
4.3
|
9.1
|
1.0
|
|
ND1
|
B:HIS54
|
4.3
|
10.5
|
1.0
|
|
CG
|
B:HIS54
|
4.3
|
9.7
|
1.0
|
|
ND1
|
B:HIS25
|
4.3
|
11.4
|
1.0
|
|
NE2
|
B:HIS101
|
4.4
|
11.4
|
1.0
|
|
CB
|
B:ASP106
|
4.4
|
12.8
|
1.0
|
|
OH
|
B:TYR109
|
4.5
|
14.4
|
1.0
|
|
CG
|
B:GLU58
|
4.5
|
14.4
|
1.0
|
|
CG1
|
B:ILE102
|
4.6
|
9.7
|
1.0
|
|
NE2
|
B:HIS77
|
4.7
|
10.8
|
1.0
|
|
CE1
|
B:PHE55
|
4.8
|
15.8
|
1.0
|
|
Iron binding site 5 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 5 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe115
b:12.7
occ:1.00
|
FE1
|
C:FEA115
|
0.0
|
12.7
|
1.0
|
|
O
|
C:FEA115
|
1.7
|
9.5
|
1.0
|
|
OE1
|
C:GLU58
|
2.2
|
13.7
|
1.0
|
|
OD1
|
C:ASP106
|
2.2
|
11.4
|
1.0
|
|
NE2
|
C:HIS77
|
2.2
|
10.3
|
1.0
|
|
NE2
|
C:HIS73
|
2.2
|
10.2
|
1.0
|
|
NE2
|
C:HIS101
|
2.2
|
10.8
|
1.0
|
|
CD
|
C:GLU58
|
3.1
|
12.9
|
1.0
|
|
CE1
|
C:HIS77
|
3.1
|
9.3
|
1.0
|
|
CG
|
C:ASP106
|
3.1
|
9.3
|
1.0
|
|
CD2
|
C:HIS101
|
3.1
|
10.8
|
1.0
|
|
FE2
|
C:FEA115
|
3.2
|
13.1
|
1.0
|
|
CE1
|
C:HIS73
|
3.2
|
8.8
|
1.0
|
|
CD2
|
C:HIS73
|
3.2
|
8.6
|
1.0
|
|
CE1
|
C:HIS101
|
3.3
|
12.2
|
1.0
|
|
CD2
|
C:HIS77
|
3.3
|
9.2
|
1.0
|
|
OE2
|
C:GLU58
|
3.3
|
10.6
|
1.0
|
|
OD2
|
C:ASP106
|
3.4
|
7.8
|
1.0
|
|
ND1
|
C:HIS77
|
4.3
|
11.3
|
1.0
|
|
CG
|
C:HIS101
|
4.3
|
11.1
|
1.0
|
|
ND1
|
C:HIS73
|
4.3
|
12.4
|
1.0
|
|
ND1
|
C:HIS101
|
4.4
|
10.4
|
1.0
|
|
CG
|
C:HIS73
|
4.4
|
11.3
|
1.0
|
|
CG
|
C:HIS77
|
4.4
|
8.2
|
1.0
|
|
CG
|
C:GLU58
|
4.5
|
14.8
|
1.0
|
|
NA
|
C:FEA115
|
4.5
|
10.5
|
1.0
|
|
NB
|
C:FEA115
|
4.5
|
13.4
|
1.0
|
|
CB
|
C:ASP106
|
4.5
|
9.6
|
1.0
|
|
NE2
|
C:HIS54
|
4.6
|
7.1
|
1.0
|
|
CE1
|
C:PHE55
|
4.7
|
13.2
|
1.0
|
|
CD1
|
C:PHE55
|
4.7
|
11.6
|
1.0
|
|
CA
|
C:ASP106
|
4.8
|
10.9
|
1.0
|
|
NC
|
C:FEA115
|
4.8
|
18.4
|
1.0
|
|
CE2
|
C:TYR109
|
4.9
|
10.7
|
1.0
|
|
CB
|
C:GLU58
|
4.9
|
11.7
|
1.0
|
|
N
|
C:ASP106
|
5.0
|
12.5
|
1.0
|
|
Iron binding site 6 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 6 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe115
b:13.1
occ:1.00
|
FE2
|
C:FEA115
|
0.0
|
13.1
|
1.0
|
|
O
|
C:FEA115
|
1.8
|
9.5
|
1.0
|
|
OD2
|
C:ASP106
|
2.1
|
7.8
|
1.0
|
|
NA
|
C:FEA115
|
2.1
|
10.5
|
1.0
|
|
NE2
|
C:HIS25
|
2.2
|
11.1
|
1.0
|
|
NE2
|
C:HIS54
|
2.2
|
7.1
|
1.0
|
|
OE2
|
C:GLU58
|
2.3
|
10.6
|
1.0
|
|
NB
|
C:FEA115
|
3.0
|
13.4
|
1.0
|
|
CG
|
C:ASP106
|
3.1
|
9.3
|
1.0
|
|
CD2
|
C:HIS25
|
3.1
|
8.6
|
1.0
|
|
CE1
|
C:HIS54
|
3.2
|
9.5
|
1.0
|
|
CD
|
C:GLU58
|
3.2
|
12.9
|
1.0
|
|
FE1
|
C:FEA115
|
3.2
|
12.7
|
1.0
|
|
CD2
|
C:HIS54
|
3.2
|
7.8
|
1.0
|
|
CE1
|
C:HIS25
|
3.3
|
9.6
|
1.0
|
|
OD1
|
C:ASP106
|
3.3
|
11.4
|
1.0
|
|
OE1
|
C:GLU58
|
3.5
|
13.7
|
1.0
|
|
NC
|
C:FEA115
|
3.9
|
18.4
|
1.0
|
|
CD2
|
C:HIS101
|
4.2
|
10.8
|
1.0
|
|
CG
|
C:HIS25
|
4.3
|
11.3
|
1.0
|
|
ND1
|
C:HIS54
|
4.3
|
8.7
|
1.0
|
|
CG
|
C:HIS54
|
4.3
|
7.1
|
1.0
|
|
ND1
|
C:HIS25
|
4.4
|
10.8
|
1.0
|
|
NE2
|
C:HIS101
|
4.4
|
10.8
|
1.0
|
|
CB
|
C:ASP106
|
4.4
|
9.6
|
1.0
|
|
OH
|
C:TYR109
|
4.5
|
12.6
|
1.0
|
|
CG
|
C:GLU58
|
4.5
|
14.8
|
1.0
|
|
CG1
|
C:ILE102
|
4.6
|
13.1
|
1.0
|
|
NE2
|
C:HIS77
|
4.7
|
10.3
|
1.0
|
|
CE1
|
C:PHE55
|
4.9
|
13.2
|
1.0
|
|
Iron binding site 7 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 7 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe115
b:11.2
occ:1.00
|
FE1
|
D:FEA115
|
0.0
|
11.2
|
1.0
|
|
O
|
D:FEA115
|
1.8
|
10.0
|
1.0
|
|
OD1
|
D:ASP106
|
2.1
|
9.8
|
1.0
|
|
OE1
|
D:GLU58
|
2.1
|
12.3
|
1.0
|
|
NE2
|
D:HIS77
|
2.2
|
9.7
|
1.0
|
|
NE2
|
D:HIS101
|
2.2
|
10.1
|
1.0
|
|
NE2
|
D:HIS73
|
2.2
|
10.0
|
1.0
|
|
CD
|
D:GLU58
|
3.1
|
7.6
|
1.0
|
|
CE1
|
D:HIS77
|
3.1
|
6.7
|
1.0
|
|
CD2
|
D:HIS101
|
3.1
|
10.1
|
1.0
|
|
CG
|
D:ASP106
|
3.1
|
7.0
|
1.0
|
|
CE1
|
D:HIS73
|
3.2
|
9.5
|
1.0
|
|
FE2
|
D:FEA115
|
3.2
|
11.5
|
1.0
|
|
CE1
|
D:HIS101
|
3.2
|
12.7
|
1.0
|
|
CD2
|
D:HIS77
|
3.3
|
8.7
|
1.0
|
|
CD2
|
D:HIS73
|
3.3
|
8.8
|
1.0
|
|
OE2
|
D:GLU58
|
3.3
|
8.9
|
1.0
|
|
OD2
|
D:ASP106
|
3.4
|
7.8
|
1.0
|
|
ND1
|
D:HIS77
|
4.2
|
8.8
|
1.0
|
|
CG
|
D:HIS101
|
4.3
|
9.1
|
1.0
|
|
ND1
|
D:HIS73
|
4.3
|
11.8
|
1.0
|
|
ND1
|
D:HIS101
|
4.3
|
10.7
|
1.0
|
|
CG
|
D:HIS77
|
4.4
|
8.6
|
1.0
|
|
CG
|
D:HIS73
|
4.4
|
10.0
|
1.0
|
|
NA
|
D:FEA115
|
4.4
|
10.4
|
1.0
|
|
CG
|
D:GLU58
|
4.5
|
9.3
|
1.0
|
|
NB
|
D:FEA115
|
4.5
|
14.8
|
1.0
|
|
CB
|
D:ASP106
|
4.5
|
6.8
|
1.0
|
|
NE2
|
D:HIS54
|
4.6
|
8.1
|
1.0
|
|
CE1
|
D:PHE55
|
4.7
|
10.1
|
1.0
|
|
CD1
|
D:PHE55
|
4.7
|
10.4
|
1.0
|
|
CA
|
D:ASP106
|
4.8
|
8.2
|
1.0
|
|
CE2
|
D:TYR109
|
4.9
|
8.6
|
1.0
|
|
CB
|
D:GLU58
|
4.9
|
9.9
|
1.0
|
|
NC
|
D:FEA115
|
4.9
|
18.0
|
1.0
|
|
N
|
D:ASP106
|
5.0
|
10.2
|
1.0
|
|
Iron binding site 8 out
of 8 in 2hmz
Go back to
Iron Binding Sites List in 2hmz
Iron binding site 8 out
of 8 in the The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of The Structures of Met and Azidomet Hemerythrin at 1.66 Angstroms Resolution within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe115
b:11.5
occ:1.00
|
FE2
|
D:FEA115
|
0.0
|
11.5
|
1.0
|
|
O
|
D:FEA115
|
1.7
|
10.0
|
1.0
|
|
NA
|
D:FEA115
|
2.0
|
10.4
|
1.0
|
|
OD2
|
D:ASP106
|
2.2
|
7.8
|
1.0
|
|
NE2
|
D:HIS54
|
2.2
|
8.1
|
1.0
|
|
NE2
|
D:HIS25
|
2.3
|
12.1
|
1.0
|
|
OE2
|
D:GLU58
|
2.4
|
8.9
|
1.0
|
|
NB
|
D:FEA115
|
2.9
|
14.8
|
1.0
|
|
CG
|
D:ASP106
|
3.1
|
7.0
|
1.0
|
|
CD2
|
D:HIS54
|
3.2
|
7.3
|
1.0
|
|
CD2
|
D:HIS25
|
3.2
|
8.1
|
1.0
|
|
FE1
|
D:FEA115
|
3.2
|
11.2
|
1.0
|
|
CD
|
D:GLU58
|
3.2
|
7.6
|
1.0
|
|
CE1
|
D:HIS54
|
3.2
|
8.7
|
1.0
|
|
CE1
|
D:HIS25
|
3.3
|
10.8
|
1.0
|
|
OD1
|
D:ASP106
|
3.3
|
9.8
|
1.0
|
|
OE1
|
D:GLU58
|
3.5
|
12.3
|
1.0
|
|
NC
|
D:FEA115
|
3.9
|
18.0
|
1.0
|
|
CD2
|
D:HIS101
|
4.1
|
10.1
|
1.0
|
|
NE2
|
D:HIS101
|
4.3
|
10.1
|
1.0
|
|
CG
|
D:HIS54
|
4.3
|
5.6
|
1.0
|
|
ND1
|
D:HIS54
|
4.3
|
7.3
|
1.0
|
|
CG
|
D:HIS25
|
4.3
|
9.0
|
1.0
|
|
ND1
|
D:HIS25
|
4.4
|
10.7
|
1.0
|
|
CB
|
D:ASP106
|
4.4
|
6.8
|
1.0
|
|
CG
|
D:GLU58
|
4.5
|
9.3
|
1.0
|
|
OH
|
D:TYR109
|
4.5
|
11.5
|
1.0
|
|
CG1
|
D:ILE102
|
4.6
|
7.0
|
1.0
|
|
NE2
|
D:HIS77
|
4.7
|
9.7
|
1.0
|
|
CE1
|
D:PHE55
|
4.9
|
10.1
|
1.0
|
|
Reference:
M.A.Holmes,
R.E.Stenkamp.
Structures of Met and Azidomet Hemerythrin at 1.66 A Resolution. J.Mol.Biol. V. 220 723 1991.
ISSN: ISSN 0022-2836
PubMed: 1870128
DOI: 10.1016/0022-2836(91)90113-K
Page generated: Sat Aug 3 23:04:40 2024
|
