Iron in PDB 2jti: Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex
Enzymatic activity of Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex
All present enzymatic activity of Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex:
1.11.1.5;
Iron Binding Sites:
The binding sites of Iron atom in the Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex
(pdb code 2jti). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex, PDB code: 2jti:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 2jti
Go back to
Iron Binding Sites List in 2jti
Iron binding site 1 out
of 2 in the Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe295
b:17.3
occ:1.00
|
FE
|
A:HEM295
|
0.0
|
17.3
|
1.0
|
NE2
|
A:HIS175
|
1.9
|
4.3
|
1.0
|
NA
|
A:HEM295
|
2.0
|
18.0
|
1.0
|
NC
|
A:HEM295
|
2.0
|
17.1
|
1.0
|
ND
|
A:HEM295
|
2.1
|
19.8
|
1.0
|
NB
|
A:HEM295
|
2.1
|
20.5
|
1.0
|
CE1
|
A:HIS175
|
2.8
|
7.7
|
1.0
|
HE1
|
A:HIS175
|
2.9
|
0.0
|
1.0
|
C1A
|
A:HEM295
|
3.0
|
19.9
|
1.0
|
C4A
|
A:HEM295
|
3.0
|
19.5
|
1.0
|
C4C
|
A:HEM295
|
3.0
|
21.6
|
1.0
|
C1D
|
A:HEM295
|
3.0
|
19.1
|
1.0
|
C1C
|
A:HEM295
|
3.1
|
20.2
|
1.0
|
CD2
|
A:HIS175
|
3.1
|
6.5
|
1.0
|
C4D
|
A:HEM295
|
3.1
|
17.6
|
1.0
|
C1B
|
A:HEM295
|
3.1
|
19.1
|
1.0
|
C4B
|
A:HEM295
|
3.2
|
17.0
|
1.0
|
CHB
|
A:HEM295
|
3.4
|
17.4
|
1.0
|
CHD
|
A:HEM295
|
3.4
|
15.1
|
1.0
|
HD2
|
A:HIS175
|
3.4
|
0.0
|
1.0
|
CHA
|
A:HEM295
|
3.5
|
17.5
|
1.0
|
CHC
|
A:HEM295
|
3.5
|
18.7
|
1.0
|
ND1
|
A:HIS175
|
4.0
|
2.2
|
1.0
|
CG
|
A:HIS175
|
4.2
|
7.3
|
1.0
|
C2A
|
A:HEM295
|
4.2
|
18.4
|
1.0
|
C3A
|
A:HEM295
|
4.2
|
17.4
|
1.0
|
C3D
|
A:HEM295
|
4.3
|
18.7
|
1.0
|
HG3
|
A:ARG48
|
4.3
|
0.0
|
1.0
|
C2C
|
A:HEM295
|
4.3
|
19.6
|
1.0
|
C2D
|
A:HEM295
|
4.3
|
19.7
|
1.0
|
C3C
|
A:HEM295
|
4.3
|
19.6
|
1.0
|
C2B
|
A:HEM295
|
4.4
|
18.4
|
1.0
|
C3B
|
A:HEM295
|
4.4
|
18.1
|
1.0
|
HHD
|
A:HEM295
|
4.5
|
0.0
|
1.0
|
HHB
|
A:HEM295
|
4.5
|
0.0
|
1.0
|
HHA
|
A:HEM295
|
4.5
|
0.0
|
1.0
|
HHC
|
A:HEM295
|
4.5
|
0.0
|
1.0
|
HE
|
A:ARG48
|
4.5
|
0.0
|
1.0
|
HE1
|
A:TRP51
|
4.6
|
0.0
|
1.0
|
HH2
|
A:TRP191
|
4.6
|
0.0
|
1.0
|
HD1
|
A:TRP51
|
4.7
|
0.0
|
1.0
|
HZ2
|
A:TRP191
|
4.8
|
0.0
|
1.0
|
HD1
|
A:HIS175
|
4.9
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 2 in 2jti
Go back to
Iron Binding Sites List in 2jti
Iron binding site 2 out
of 2 in the Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Solution Structure of the Yeast Iso-1-Cytochrome C (T12A) : Yeast Cytochrome C Peroxidase Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe104
b:26.0
occ:1.00
|
FE
|
B:HEC104
|
0.0
|
26.0
|
1.0
|
NE2
|
B:HIS18
|
1.9
|
4.1
|
1.0
|
NB
|
B:HEC104
|
2.0
|
28.1
|
1.0
|
NA
|
B:HEC104
|
2.0
|
30.5
|
1.0
|
ND
|
B:HEC104
|
2.0
|
30.8
|
1.0
|
NC
|
B:HEC104
|
2.1
|
31.3
|
1.0
|
SD
|
B:MET80
|
2.2
|
21.3
|
1.0
|
CE1
|
B:HIS18
|
2.8
|
9.7
|
1.0
|
C1B
|
B:HEC104
|
3.0
|
29.4
|
1.0
|
HE1
|
B:HIS18
|
3.0
|
0.0
|
1.0
|
C4B
|
B:HEC104
|
3.0
|
28.1
|
1.0
|
C4A
|
B:HEC104
|
3.0
|
31.0
|
1.0
|
CD2
|
B:HIS18
|
3.0
|
3.0
|
1.0
|
C4D
|
B:HEC104
|
3.1
|
31.4
|
1.0
|
C1D
|
B:HEC104
|
3.1
|
30.6
|
1.0
|
C1C
|
B:HEC104
|
3.1
|
31.1
|
1.0
|
C1A
|
B:HEC104
|
3.1
|
30.4
|
1.0
|
C4C
|
B:HEC104
|
3.1
|
30.9
|
1.0
|
CE
|
B:MET80
|
3.3
|
16.6
|
1.0
|
HE1
|
B:MET80
|
3.3
|
0.0
|
1.0
|
CHB
|
B:HEC104
|
3.3
|
31.9
|
1.0
|
HD2
|
B:HIS18
|
3.4
|
0.0
|
1.0
|
CHC
|
B:HEC104
|
3.4
|
30.5
|
1.0
|
CHD
|
B:HEC104
|
3.4
|
30.6
|
1.0
|
CHA
|
B:HEC104
|
3.5
|
31.5
|
1.0
|
HB2
|
B:MET80
|
3.5
|
0.0
|
1.0
|
HE3
|
B:MET80
|
3.6
|
0.0
|
1.0
|
CG
|
B:MET80
|
3.7
|
19.8
|
1.0
|
HB3
|
B:MET80
|
3.9
|
0.0
|
1.0
|
CB
|
B:MET80
|
3.9
|
26.1
|
1.0
|
ND1
|
B:HIS18
|
4.0
|
8.6
|
1.0
|
HG2
|
B:MET80
|
4.1
|
0.0
|
1.0
|
CG
|
B:HIS18
|
4.1
|
9.0
|
1.0
|
C2B
|
B:HEC104
|
4.2
|
29.4
|
1.0
|
HE2
|
B:MET80
|
4.3
|
0.0
|
1.0
|
C3B
|
B:HEC104
|
4.3
|
27.7
|
1.0
|
C3D
|
B:HEC104
|
4.3
|
31.5
|
1.0
|
C2A
|
B:HEC104
|
4.3
|
33.2
|
1.0
|
C3A
|
B:HEC104
|
4.3
|
33.3
|
1.0
|
C2D
|
B:HEC104
|
4.3
|
33.0
|
1.0
|
C2C
|
B:HEC104
|
4.3
|
32.5
|
1.0
|
C3C
|
B:HEC104
|
4.3
|
31.8
|
1.0
|
HHB
|
B:HEC104
|
4.4
|
0.0
|
1.0
|
HHD
|
B:HEC104
|
4.5
|
0.0
|
1.0
|
HHC
|
B:HEC104
|
4.5
|
0.0
|
1.0
|
HG3
|
B:MET80
|
4.5
|
0.0
|
1.0
|
HHA
|
B:HEC104
|
4.5
|
0.0
|
1.0
|
HE2
|
B:TYR67
|
4.6
|
0.0
|
1.0
|
HB2
|
B:CYS17
|
4.6
|
0.0
|
1.0
|
HD2
|
B:PRO30
|
4.6
|
0.0
|
1.0
|
HD1
|
B:HIS18
|
4.9
|
0.0
|
1.0
|
HD12
|
B:LEU32
|
5.0
|
0.0
|
1.0
|
|
Reference:
A.N.Volkov,
Q.Bashir,
J.A.Worrall,
G.M.Ullmann,
M.Ubbink.
Shifting the Equilibrium Between the Encounter State and the Specific Form of A Protein Complex By Interfacial Point Mutations. J.Am.Chem.Soc. V. 132 11487 2010.
ISSN: ISSN 0002-7863
PubMed: 20672804
DOI: 10.1021/JA100867C
Page generated: Sat Aug 3 23:52:32 2024
|