Iron in PDB 2mjd: Oxidized Yeast Adrenodoxin Homolog 1

The binding sites of Iron atom in the Oxidized Yeast Adrenodoxin Homolog 1 (pdb code 2mjd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Oxidized Yeast Adrenodoxin Homolog 1, PDB code: 2mjd:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Oxidized Yeast Adrenodoxin Homolog 1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Oxidized Yeast Adrenodoxin Homolog 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:0.0 occ:1.00 FE1 A:FES201 0.0 0.0 1.0 S2 A:FES201 2.2 0.0 1.0 S1 A:FES201 2.2 0.0 1.0 SG A:CYS47 2.3 0.0 1.0 SG A:CYS41 2.3 0.0 1.0 FE2 A:FES201 2.5 0.0 1.0 H A:SER48 2.8 0.0 1.0 HB3 A:CYS41 3.3 0.0 1.0 CB A:CYS47 3.5 0.0 1.0 CB A:CYS41 3.5 0.0 1.0 HB3 A:CYS47 3.5 0.0 1.0 HA A:CYS47 3.7 0.0 1.0 N A:SER48 3.7 0.0 1.0 HE2 A:MET72 3.8 0.0 1.0 HB2 A:CYS41 3.8 0.0 1.0 HD22 A:LEU27 3.8 0.0 1.0 CA A:CYS47 4.0 0.0 1.0 HB2 A:CYS50 4.0 0.0 1.0 HB3 A:CYS87 4.2 0.0 1.0 SG A:CYS50 4.2 0.0 1.0 HE3 A:MET72 4.2 0.0 1.0 C A:CYS47 4.3 0.0 1.0 SG A:CYS87 4.3 0.0 1.0 HB2 A:CYS47 4.4 0.0 1.0 CE A:MET72 4.5 0.0 1.0 CD2 A:LEU27 4.7 0.0 1.0 HA A:CYS50 4.7 0.0 1.0 HD21 A:LEU27 4.7 0.0 1.0 CB A:CYS50 4.7 0.0 1.0 CB A:CYS87 4.7 0.0 1.0 HB2 A:CYS87 4.8 0.0 1.0 HD23 A:LEU27 4.8 0.0 1.0 CA A:CYS41 4.9 0.0 1.0 CA A:SER48 4.9 0.0 1.0 HB3 A:SER48 4.9 0.0 1.0 HB2 A:SER48 4.9 0.0 1.0 H A:CYS50 5.0 0.0 1.0

Iron binding site 2 out of 2 in the Oxidized Yeast Adrenodoxin Homolog 1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Oxidized Yeast Adrenodoxin Homolog 1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:0.0 occ:1.00 FE2 A:FES201 0.0 0.0 1.0 S2 A:FES201 2.2 0.0 1.0 S1 A:FES201 2.2 0.0 1.0 SG A:CYS87 2.3 0.0 1.0 SG A:CYS50 2.3 0.0 1.0 FE1 A:FES201 2.5 0.0 1.0 HA A:CYS50 2.8 0.0 1.0 HE2 A:MET72 3.1 0.0 1.0 HB2 A:CYS50 3.2 0.0 1.0 CB A:CYS50 3.2 0.0 1.0 CB A:CYS87 3.3 0.0 1.0 HB2 A:CYS87 3.3 0.0 1.0 HB3 A:CYS87 3.3 0.0 1.0 HB2 A:LEU85 3.4 0.0 1.0 CA A:CYS50 3.6 0.0 1.0 HD11 A:LEU85 3.9 0.0 1.0 HB3 A:CYS41 4.0 0.0 1.0 HE3 A:MET72 4.0 0.0 1.0 CE A:MET72 4.0 0.0 1.0 HD21 A:LEU27 4.0 0.0 1.0 SG A:CYS41 4.1 0.0 1.0 HD22 A:LEU27 4.1 0.0 1.0 H A:SER48 4.2 0.0 1.0 H A:CYS87 4.2 0.0 1.0 H A:CYS50 4.2 0.0 1.0 HB3 A:CYS50 4.2 0.0 1.0 HB2 A:CYS41 4.3 0.0 1.0 H A:GLY86 4.3 0.0 1.0 N A:CYS50 4.3 0.0 1.0 CB A:CYS41 4.4 0.0 1.0 HE1 A:MET72 4.5 0.0 1.0 CB A:LEU85 4.5 0.0 1.0 SG A:CYS47 4.5 0.0 1.0 CD2 A:LEU27 4.6 0.0 1.0 C A:CYS50 4.6 0.0 1.0 CA A:CYS87 4.7 0.0 1.0 O A:CYS50 4.7 0.0 1.0 N A:CYS87 4.8 0.0 1.0 N A:GLY86 4.8 0.0 1.0 HG A:LEU85 4.9 0.0 1.0 HD23 A:LEU73 4.9 0.0 1.0 CD1 A:LEU85 4.9 0.0 1.0 HA A:LEU85 4.9 0.0 1.0 HB3 A:LEU85 5.0 0.0 1.0 HB3 A:SER48 5.0 0.0 1.0 HD23 A:LEU27 5.0 0.0 1.0

H.Webert, S.A.Freibert, A.Gallo, T.Heidenreich, U.Linne, S.Amlacher, E.Hurt, U.Muhlenhoff, L.Banci, R.Lill. Functional Reconstitution of Mitochondrial Fe/S Cluster Synthesis on ISU1 Reveals the Involvement of Ferredoxin. Nat Commun V. 5 5013 2014.
ISSN: ESSN 2041-1723
PubMed: 25358379
DOI: 10.1038/NCOMMS6013