Iron in PDB 2n18: Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase

All present enzymatic activity of Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase:
1.11.1.5;

The binding sites of Iron atom in the Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase (pdb code 2n18). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase, PDB code: 2n18:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in the Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe301 b:15.1 occ:1.00 FE A:HEM301 0.0 15.1 1.0 NC A:HEM301 2.0 13.7 1.0 ND A:HEM301 2.0 14.0 1.0 NB A:HEM301 2.0 15.9 1.0 NA A:HEM301 2.0 13.0 1.0 NE2 A:HIS175 2.1 13.8 1.0 C4C A:HEM301 3.0 16.2 1.0 C1C A:HEM301 3.0 15.7 1.0 C1A A:HEM301 3.0 14.2 1.0 C4D A:HEM301 3.0 15.7 1.0 C1D A:HEM301 3.0 13.5 1.0 CD2 A:HIS175 3.1 13.7 1.0 CE1 A:HIS175 3.1 15.2 1.0 C4B A:HEM301 3.1 15.1 1.0 C4A A:HEM301 3.1 15.4 1.0 C1B A:HEM301 3.1 15.9 1.0 HD2 A:HIS175 3.3 0.0 1.0 HE1 A:HIS175 3.3 0.0 1.0 CHA A:HEM301 3.4 13.0 1.0 CHD A:HEM301 3.4 14.2 1.0 CHC A:HEM301 3.5 15.2 1.0 CHB A:HEM301 3.5 14.0 1.0 HE1 A:TRP51 3.5 0.0 1.0 HG3 A:ARG48 4.1 0.0 1.0 NE1 A:TRP51 4.1 15.7 1.0 ND1 A:HIS175 4.2 15.0 1.0 CG A:HIS175 4.2 15.5 1.0 C2C A:HEM301 4.2 12.7 1.0 C2A A:HEM301 4.2 12.6 1.0 C3D A:HEM301 4.3 14.6 1.0 C3C A:HEM301 4.3 15.6 1.0 HD1 A:TRP51 4.3 0.0 1.0 C2D A:HEM301 4.3 16.6 1.0 C3A A:HEM301 4.3 14.9 1.0 C3B A:HEM301 4.3 16.4 1.0 C2B A:HEM301 4.4 13.2 1.0 HH2 A:TRP191 4.4 0.0 1.0 HHA A:HEM301 4.5 0.0 1.0 HHD A:HEM301 4.5 0.0 1.0 CD1 A:TRP51 4.5 17.3 1.0 HHC A:HEM301 4.5 0.0 1.0 HZ2 A:TRP191 4.5 0.0 1.0 HHB A:HEM301 4.6 0.0 1.0 HE2 A:HIS52 4.9 0.0 1.0 CH2 A:TRP191 4.9 18.0 1.0 HD13 A:LEU232 4.9 0.0 1.0

Iron binding site 2 out of 3 in the Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:19.1 occ:1.00 FE B:HEC201 0.0 19.1 1.0 NB B:HEC201 2.0 18.7 1.0 ND B:HEC201 2.0 22.1 1.0 NA B:HEC201 2.0 21.3 1.0 NC B:HEC201 2.0 19.3 1.0 NE2 B:HIS18 2.0 20.6 1.0 SD B:MET80 2.2 18.8 1.0 CE1 B:HIS18 2.9 23.7 1.0 C4B B:HEC201 3.0 18.4 1.0 C1D B:HEC201 3.0 20.7 1.0 C1C B:HEC201 3.0 19.3 1.0 C1B B:HEC201 3.0 18.2 1.0 C4C B:HEC201 3.0 20.7 1.0 C4A B:HEC201 3.0 21.4 1.0 C4D B:HEC201 3.0 21.9 1.0 C1A B:HEC201 3.1 19.5 1.0 HE1 B:HIS18 3.1 0.0 1.0 CD2 B:HIS18 3.1 22.6 1.0 HG3 B:MET80 3.1 0.0 1.0 CG B:MET80 3.3 17.6 1.0 CHD B:HEC201 3.4 21.7 1.0 CHC B:HEC201 3.4 18.0 1.0 HD2 B:HIS18 3.4 0.0 1.0 CE B:MET80 3.4 15.0 1.0 CHB B:HEC201 3.4 20.7 1.0 CHA B:HEC201 3.4 21.8 1.0 HE3 B:MET80 3.5 0.0 1.0 HE1 B:MET80 3.6 0.0 1.0 HB2 B:MET80 3.8 0.0 1.0 HH B:TYR67 4.0 0.0 1.0 ND1 B:HIS18 4.1 23.7 1.0 HG2 B:MET80 4.1 0.0 1.0 CB B:MET80 4.1 19.6 1.0 C3B B:HEC201 4.2 18.9 1.0 CG B:HIS18 4.2 23.1 1.0 C2B B:HEC201 4.2 17.6 1.0 C2D B:HEC201 4.2 22.6 1.0 C3A B:HEC201 4.3 19.0 1.0 C2C B:HEC201 4.3 19.0 1.0 C3D B:HEC201 4.3 21.1 1.0 C3C B:HEC201 4.3 19.8 1.0 C2A B:HEC201 4.3 21.0 1.0 HE2 B:MET80 4.4 0.0 1.0 HHD B:HEC201 4.4 0.0 1.0 HHC B:HEC201 4.4 0.0 1.0 HHB B:HEC201 4.5 0.0 1.0 HHA B:HEC201 4.5 0.0 1.0 HE2 B:TYR67 4.5 0.0 1.0 HB2 B:CYS17 4.6 0.0 1.0 HA3 B:GLY29 4.7 0.0 1.0 HD2 B:PRO30 4.7 0.0 1.0 HB3 B:MET80 4.8 0.0 1.0 HD22 B:LEU32 4.8 0.0 1.0 OH B:TYR67 4.9 20.8 1.0 HD12 B:LEU32 4.9 0.0 1.0 HD1 B:HIS18 4.9 0.0 1.0

Iron binding site 3 out of 3 in the Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Dominant Form of the Low-Affinity Complex of Yeast Cytochrome C and Cytochrome C Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:26.0 occ:1.00 FE C:HEC201 0.0 26.0 1.0 NE2 C:HIS18 1.9 4.1 1.0 NB C:HEC201 2.0 28.1 1.0 ND C:HEC201 2.0 30.8 1.0 NA C:HEC201 2.0 30.5 1.0 NC C:HEC201 2.0 31.3 1.0 SD C:MET80 2.2 21.3 1.0 CE1 C:HIS18 2.8 9.7 1.0 HE1 C:HIS18 3.0 0.0 1.0 C1B C:HEC201 3.0 29.4 1.0 C4B C:HEC201 3.0 28.1 1.0 CD2 C:HIS18 3.0 3.0 1.0 C4A C:HEC201 3.0 31.0 1.0 C4D C:HEC201 3.0 31.4 1.0 C1D C:HEC201 3.0 30.6 1.0 C1C C:HEC201 3.0 31.1 1.0 C1A C:HEC201 3.1 30.4 1.0 C4C C:HEC201 3.1 30.9 1.0 CE C:MET80 3.2 16.6 1.0 HE1 C:MET80 3.3 0.0 1.0 CHB C:HEC201 3.3 31.9 1.0 HD2 C:HIS18 3.4 0.0 1.0 HB2 C:MET80 3.4 0.0 1.0 HE2 C:MET80 3.4 0.0 1.0 CHC C:HEC201 3.4 30.5 1.0 CHD C:HEC201 3.4 30.6 1.0 CHA C:HEC201 3.5 31.5 1.0 CG C:MET80 3.6 19.8 1.0 HG3 C:MET80 3.9 0.0 1.0 ND1 C:HIS18 4.0 8.6 1.0 CB C:MET80 4.0 26.1 1.0 HH C:TYR67 4.0 0.0 1.0 CG C:HIS18 4.1 9.0 1.0 HE3 C:MET80 4.2 0.0 1.0 C2B C:HEC201 4.2 29.4 1.0 C3B C:HEC201 4.2 27.7 1.0 C3D C:HEC201 4.2 31.5 1.0 C2A C:HEC201 4.2 33.2 1.0 C3A C:HEC201 4.2 33.3 1.0 C2D C:HEC201 4.2 33.0 1.0 C2C C:HEC201 4.3 32.5 1.0 C3C C:HEC201 4.3 31.8 1.0 HB3 C:MET80 4.3 0.0 1.0 HHB C:HEC201 4.4 0.0 1.0 HHC C:HEC201 4.5 0.0 1.0 HHD C:HEC201 4.5 0.0 1.0 HG2 C:MET80 4.5 0.0 1.0 HHA C:HEC201 4.5 0.0 1.0 HA3 C:GLY29 4.6 0.0 1.0 HD2 C:PRO30 4.6 0.0 1.0 HE2 C:TYR67 4.6 0.0 1.0 HB2 C:CYS17 4.7 0.0 1.0 HD1 C:HIS18 4.8 0.0 1.0 OH C:TYR67 4.9 31.9 1.0 HD13 C:LEU32 5.0 0.0 1.0

K.Van De Water, Y.G.Sterckx, A.N.Volkov. The Low-Affinity Complex of Cytochrome C and Its Peroxidase. Nat Commun V. 6 7073 2015.
ISSN: ESSN 2041-1723
PubMed: 25944250
DOI: 10.1038/NCOMMS8073