Atomistry » Iron » PDB 2orl-2pg7 » 2ors
Atomistry »
  Iron »
    PDB 2orl-2pg7 »
      2ors »

Iron in PDB 2ors: Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex

Enzymatic activity of Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex

All present enzymatic activity of Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex:
1.14.13.39;

Protein crystallography data

The structure of Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex, PDB code: 2ors was solved by M.Adler, M.Whitlow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.26 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.581, 74.857, 93.775, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 23.7

Iron Binding Sites:

The binding sites of Iron atom in the Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex (pdb code 2ors). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex, PDB code: 2ors:

Iron binding site 1 out of 1 in 2ors

Go back to Iron Binding Sites List in 2ors
Iron binding site 1 out of 1 in the Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Benzo[1,3]Dioxol-5-Yloxy)-2-(4-Imidazol-1- Yl-Phenoxy)-6-Methyl-Pyrimidine Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe600

b:32.0
occ:1.00
 FE A:HEM600 0.0 32.0 1.0
NB A:HEM600 2.0 33.3 1.0
NC A:HEM600 2.0 31.4 1.0
ND A:HEM600 2.0 31.6 1.0
NA A:HEM600 2.0 33.8 1.0
SG A:CYS194 2.2 31.9 1.0
NFE A:391601 2.3 35.0 1.0
C1B A:HEM600 3.0 33.3 1.0
C4C A:HEM600 3.0 28.8 1.0
C4B A:HEM600 3.0 32.5 1.0
C1C A:HEM600 3.0 30.4 1.0
C1D A:HEM600 3.0 29.5 1.0
C4A A:HEM600 3.0 34.3 1.0
C4D A:HEM600 3.1 29.9 1.0
C1A A:HEM600 3.1 35.1 1.0
C2 A:391601 3.1 36.2 1.0
C5 A:391601 3.4 31.9 1.0
CHD A:HEM600 3.4 29.1 1.0
CHB A:HEM600 3.4 32.2 1.0
CHC A:HEM600 3.4 30.6 1.0
CB A:CYS194 3.5 29.8 1.0
CHA A:HEM600 3.5 32.1 1.0
CA A:CYS194 4.2 30.5 1.0
C2B A:HEM600 4.2 34.1 1.0
C3B A:HEM600 4.3 32.1 1.0
C2C A:HEM600 4.3 26.7 1.0
C3C A:HEM600 4.3 26.2 1.0
C3A A:HEM600 4.3 35.9 1.0
C3D A:HEM600 4.3 28.5 1.0
C2D A:HEM600 4.3 28.7 1.0
C2A A:HEM600 4.3 35.8 1.0
N3 A:391601 4.3 36.8 1.0
C4 A:391601 4.4 33.8 1.0
NE1 A:TRP188 4.5 24.0 1.0
N A:GLY196 4.9 34.7 1.0
C A:CYS194 4.9 32.0 1.0

Reference:

D.D.Davey, M.Adler, D.Arnaia, K.Eagen, S.Erickson, W.Guilford, M.Kenrick, M.M.Morrissey, M.Ohimeyer, G.Pan, V.M.Paradkar, J.Parkinson, M.Polokoff, K.Salonz, C.Santos, B.Subramanyam, R.Vergona, R.G.Wei, M.Whitlow, B.Ye, Z.S.Zhao, J.J.Devlin, G.Phillips. Design, Synthesis, and Activity of 2-Imidazol-1-Ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors J.Med.Chem. V. 50 1146 2007.
ISSN: ISSN 0022-2623
PubMed: 17315988
DOI: 10.1021/JM061319I
Page generated: Sun Aug 4 01:07:07 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy