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Iron in PDB 2p1s: Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution

Protein crystallography data

The structure of Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution, PDB code: 2p1s was solved by R.Mir, N.Singh, M.Sinha, S.Sharma, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.25 / 1.93
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.155, 50.425, 65.883, 90.00, 107.70, 90.00
R / Rfree (%) 17 / 21.7

Other elements in 2p1s:

The structure of Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution (pdb code 2p1s). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution, PDB code: 2p1s:

Iron binding site 1 out of 1 in 2p1s

Go back to Iron Binding Sites List in 2p1s
Iron binding site 1 out of 1 in the Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D- Fructofuranosyl- (2 1)- Alpha-D-Glucopyranoside at 1.93 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe686

b:17.9
occ:1.00
OH A:TYR526 1.9 16.1 1.0
OH A:TYR433 2.0 13.4 1.0
OD1 A:ASP395 2.1 13.0 1.0
O1 A:CO3687 2.1 17.9 1.0
O2 A:CO3687 2.1 16.8 1.0
NE2 A:HIS595 2.2 16.0 1.0
C A:CO3687 2.4 17.1 1.0
CZ A:TYR433 3.0 13.5 1.0
CZ A:TYR526 3.1 15.5 1.0
CG A:ASP395 3.1 14.5 1.0
CD2 A:HIS595 3.2 11.2 1.0
CE1 A:HIS595 3.2 14.0 1.0
CE1 A:TYR433 3.6 15.6 1.0
O3 A:CO3687 3.7 15.2 1.0
CB A:ASP395 3.8 14.2 1.0
CE1 A:TYR526 3.8 13.4 1.0
O A:HOH2013 3.8 18.7 1.0
CE2 A:TYR526 3.9 14.2 1.0
CE2 A:TYR433 3.9 14.8 1.0
O A:HOH2012 4.0 15.3 1.0
OD2 A:ASP395 4.1 15.6 1.0
ND1 A:HIS595 4.3 17.0 1.0
CG A:HIS595 4.3 14.4 1.0
NH2 A:ARG463 4.4 23.4 1.0
CB A:THR464 4.4 13.9 1.0
CA A:ASP395 4.5 13.9 1.0
N A:ALA465 4.7 15.1 1.0
N A:THR464 4.8 14.5 1.0
NE A:ARG463 4.8 20.6 1.0
OG1 A:THR464 4.8 13.3 1.0
CD1 A:TYR433 4.9 15.7 1.0

Reference:

R.Mir, N.Singh, M.Sinha, S.Sharma, P.Kaur, T.P.Singh. Crystal Structure of the C-Terminal Lobe of Bovine Lactoferrin Complexed with O-Alpha-D-Glucopyranosyl-(1 3)-Alpha-D-Fructofuranosyl-(2 1)-Alpha-D-Glucopyranoside at 1.93 A Resolution To Be Published.
Page generated: Sun Dec 13 14:50:52 2020

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