Iron in PDB 2pcc: Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C

The structure of Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C, PDB code: 2pcc was solved by H.Pelletier, J.Kraut, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	6.00 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	88.400, 118.600, 45.100, 90.00, 104.60, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Iron atom in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C (pdb code 2pcc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C, PDB code: 2pcc:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe296 b:17.3 occ:1.00 FE A:HEM296 0.0 17.3 1.0 NE2 A:HIS175 1.9 4.3 1.0 NA A:HEM296 2.0 18.0 1.0 NC A:HEM296 2.0 17.1 1.0 ND A:HEM296 2.1 19.8 1.0 NB A:HEM296 2.1 20.5 1.0 S A:SO4299 2.4 29.4 1.0 CE1 A:HIS175 2.8 7.7 1.0 C1A A:HEM296 3.0 19.9 1.0 C4A A:HEM296 3.0 19.5 1.0 C4C A:HEM296 3.0 21.6 1.0 C1D A:HEM296 3.0 19.1 1.0 C1C A:HEM296 3.1 20.2 1.0 CD2 A:HIS175 3.1 6.5 1.0 C4D A:HEM296 3.1 17.6 1.0 C1B A:HEM296 3.1 19.1 1.0 C4B A:HEM296 3.2 17.0 1.0 CHB A:HEM296 3.4 17.4 1.0 CHD A:HEM296 3.4 15.1 1.0 CHA A:HEM296 3.5 17.5 1.0 CHC A:HEM296 3.5 18.7 1.0 O1 A:SO4299 3.9 28.5 1.0 ND1 A:HIS175 4.0 2.2 1.0 CG A:HIS175 4.1 7.3 1.0 C2A A:HEM296 4.2 18.4 1.0 C3A A:HEM296 4.2 17.4 1.0 C3D A:HEM296 4.3 18.7 1.0 C2C A:HEM296 4.3 19.6 1.0 C2D A:HEM296 4.3 19.7 1.0 C3C A:HEM296 4.3 19.6 1.0 C2B A:HEM296 4.4 18.4 1.0 C3B A:HEM296 4.4 18.1 1.0 NE1 A:TRP51 4.4 23.1 1.0 CD1 A:TRP51 4.8 13.0 1.0

Iron binding site 2 out of 4 in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe104 b:26.0 occ:1.00 FE B:HEM104 0.0 26.0 1.0 NE2 B:HIS18 1.9 4.1 1.0 NB B:HEM104 2.0 28.1 1.0 ND B:HEM104 2.0 30.8 1.0 NA B:HEM104 2.0 30.5 1.0 NC B:HEM104 2.0 31.3 1.0 SD B:MET80 2.2 21.3 1.0 CE1 B:HIS18 2.8 9.7 1.0 C1B B:HEM104 3.0 29.4 1.0 C4B B:HEM104 3.0 28.1 1.0 CD2 B:HIS18 3.0 3.0 1.0 C4A B:HEM104 3.0 31.0 1.0 C4D B:HEM104 3.0 31.4 1.0 C1D B:HEM104 3.0 30.6 1.0 C1C B:HEM104 3.0 31.1 1.0 C1A B:HEM104 3.1 30.4 1.0 C4C B:HEM104 3.1 30.9 1.0 CE B:MET80 3.2 16.6 1.0 CHB B:HEM104 3.3 31.9 1.0 CHC B:HEM104 3.4 30.5 1.0 CHD B:HEM104 3.4 30.6 1.0 CHA B:HEM104 3.5 31.5 1.0 CG B:MET80 3.6 19.8 1.0 ND1 B:HIS18 4.0 8.6 1.0 CB B:MET80 4.0 26.1 1.0 CG B:HIS18 4.1 9.0 1.0 C2B B:HEM104 4.2 29.4 1.0 C3B B:HEM104 4.2 27.7 1.0 C3D B:HEM104 4.2 31.5 1.0 C2A B:HEM104 4.2 33.2 1.0 C3A B:HEM104 4.2 33.3 1.0 C2D B:HEM104 4.2 33.0 1.0 C2C B:HEM104 4.3 32.5 1.0 C3C B:HEM104 4.3 31.8 1.0 OH B:TYR67 4.9 31.9 1.0

Iron binding site 3 out of 4 in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe296 b:17.4 occ:1.00 FE C:HEM296 0.0 17.4 1.0 NA C:HEM296 1.9 16.1 1.0 NC C:HEM296 2.0 16.4 1.0 NB C:HEM296 2.0 18.4 1.0 ND C:HEM296 2.1 15.2 1.0 S C:SO4300 2.1 22.3 1.0 NE2 C:HIS175 2.1 14.2 1.0 CE1 C:HIS175 2.9 19.4 1.0 C4A C:HEM296 3.0 18.1 1.0 C4C C:HEM296 3.0 16.2 1.0 C1D C:HEM296 3.1 12.5 1.0 C1A C:HEM296 3.1 18.9 1.0 C1B C:HEM296 3.1 17.1 1.0 C1C C:HEM296 3.1 19.1 1.0 C4D C:HEM296 3.1 14.9 1.0 C4B C:HEM296 3.1 17.0 1.0 CD2 C:HIS175 3.3 17.0 1.0 CHB C:HEM296 3.3 16.0 1.0 CHD C:HEM296 3.4 12.2 1.0 CHC C:HEM296 3.5 19.5 1.0 CHA C:HEM296 3.5 16.3 1.0 O1 C:SO4300 3.6 25.6 1.0 ND1 C:HIS175 4.1 16.3 1.0 C3A C:HEM296 4.2 18.0 1.0 C2A C:HEM296 4.2 15.8 1.0 C3C C:HEM296 4.2 15.3 1.0 C2C C:HEM296 4.3 13.2 1.0 C2D C:HEM296 4.3 15.7 1.0 C2B C:HEM296 4.3 17.0 1.0 C3D C:HEM296 4.3 16.1 1.0 C3B C:HEM296 4.3 16.6 1.0 CG C:HIS175 4.3 15.8 1.0 NE1 C:TRP51 4.3 20.9 1.0 CD1 C:TRP51 4.7 19.7 1.0 CD C:ARG48 5.0 17.5 1.0

Iron binding site 4 out of 4 in the Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe104 b:32.4 occ:1.00 FE D:HEM104 0.0 32.4 1.0 NB D:HEM104 2.0 30.4 1.0 ND D:HEM104 2.0 31.0 1.0 NA D:HEM104 2.0 32.4 1.0 NC D:HEM104 2.0 36.1 1.0 NE2 D:HIS18 2.0 16.3 1.0 SD D:MET80 2.2 37.1 1.0 CE D:MET80 2.7 34.9 1.0 CE1 D:HIS18 2.8 18.1 1.0 C1B D:HEM104 3.0 29.8 1.0 C4B D:HEM104 3.0 32.0 1.0 C4A D:HEM104 3.0 32.1 1.0 C4D D:HEM104 3.0 32.4 1.0 C1A D:HEM104 3.0 33.7 1.0 C1D D:HEM104 3.0 30.5 1.0 C4C D:HEM104 3.0 33.4 1.0 C1C D:HEM104 3.1 34.8 1.0 CD2 D:HIS18 3.2 20.2 1.0 CHB D:HEM104 3.3 31.9 1.0 CHC D:HEM104 3.4 33.6 1.0 CHD D:HEM104 3.4 34.9 1.0 CHA D:HEM104 3.4 33.6 1.0 CG D:MET80 3.6 32.4 1.0 ND1 D:HIS18 4.1 16.9 1.0 C2B D:HEM104 4.2 29.8 1.0 C3D D:HEM104 4.2 32.6 1.0 C2A D:HEM104 4.2 35.1 1.0 C3A D:HEM104 4.2 33.7 1.0 C3B D:HEM104 4.2 31.5 1.0 C3C D:HEM104 4.3 33.1 1.0 CB D:MET80 4.3 34.4 1.0 C2C D:HEM104 4.3 32.1 1.0 C2D D:HEM104 4.3 29.8 1.0 CG D:HIS18 4.3 15.0 1.0 OH D:TYR67 4.7 43.2 1.0

H.Pelletier, J.Kraut. Crystal Structure of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase and Cytochrome C. Science V. 258 1748 1992.
ISSN: ISSN 0036-8075
PubMed: 1334573