Iron in PDB 2r13: Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination

The structure of Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination, PDB code: 2r13 was solved by X.Hou, R.Liu, S.Ross, E.J.Smart, H.Zhu, W.Gong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.80
Space group	I 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	58.794, 58.794, 175.306, 90.00, 90.00, 90.00
R / Rfree (%)	15.9 / 18.8

The structure of Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Iron atom in the Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination (pdb code 2r13). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination, PDB code: 2r13:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe204 b:18.3 occ:1.00 FE1 A:FES204 0.0 18.3 1.0 S2 A:FES204 2.2 20.1 1.0 S1 A:FES204 2.2 18.9 1.0 SG A:CYS74 2.3 17.8 1.0 SG A:CYS72 2.3 18.0 1.0 FE2 A:FES204 2.7 19.9 1.0 CB A:CYS74 3.4 17.0 1.0 CB A:CYS72 3.4 17.4 1.0 N A:CYS74 3.6 16.0 1.0 CA A:CYS72 3.8 17.4 1.0 N A:ARG73 3.9 15.8 1.0 CA A:CYS74 3.9 16.4 1.0 CB A:HIS87 4.1 20.1 1.0 ND1 A:HIS87 4.2 19.2 1.0 C A:CYS72 4.2 17.2 1.0 N A:HIS87 4.3 20.3 1.0 N A:TRP75 4.3 16.2 1.0 C A:CYS74 4.4 16.1 1.0 CB A:SER77 4.5 20.6 1.0 N A:SER77 4.5 19.4 1.0 CA A:HIS87 4.6 20.3 1.0 N A:ARG76 4.6 17.1 1.0 CG A:HIS87 4.6 20.2 1.0 C A:ARG73 4.7 15.9 1.0 SG A:CYS83 4.7 21.7 1.0 CB A:CYS83 4.8 21.4 1.0 CA A:CYS83 4.8 21.8 1.0 CA A:ARG73 4.9 16.0 1.0 CA A:SER77 5.0 20.5 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Human Mitoneet Reveals A Novel [2FE-2S] Cluster Coordination within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe204 b:19.9 occ:1.00 FE2 A:FES204 0.0 19.9 1.0 ND1 A:HIS87 2.0 19.2 1.0 S2 A:FES204 2.2 20.1 1.0 S1 A:FES204 2.2 18.9 1.0 SG A:CYS83 2.3 21.7 1.0 FE1 A:FES204 2.7 18.3 1.0 CE1 A:HIS87 2.9 21.5 1.0 CG A:HIS87 3.1 20.2 1.0 CB A:CYS83 3.3 21.4 1.0 CB A:HIS87 3.6 20.1 1.0 CA A:CYS83 3.9 21.8 1.0 N A:HIS87 4.0 20.3 1.0 N A:GLY85 4.0 22.4 1.0 NE2 A:HIS87 4.0 21.4 1.0 CD2 A:HIS87 4.2 22.1 1.0 CD A:PRO100 4.2 18.3 1.0 CA A:GLY85 4.3 22.2 1.0 CB A:PRO100 4.3 18.2 1.0 N A:ASP84 4.3 22.1 1.0 CA A:HIS87 4.4 20.3 1.0 CG A:PRO100 4.4 18.6 1.0 SG A:CYS74 4.5 17.8 1.0 N A:ALA86 4.5 21.1 1.0 C A:CYS83 4.5 22.5 1.0 C A:GLY85 4.5 22.1 1.0 SG A:CYS72 4.7 18.0 1.0 N A:PRO100 4.7 18.5 1.0 CA A:CYS72 4.7 17.4 1.0 CB A:CYS72 4.8 17.4 1.0 CA A:PRO100 4.9 18.7 1.0

X.Hou, R.Liu, S.Ross, E.J.Smart, H.Zhu, W.Gong. Crystallographic Studies of Human Mitoneet J.Biol.Chem. V. 282 33242 2007.
ISSN: ISSN 0021-9258
PubMed: 17905743
DOI: 10.1074/JBC.C700172200