Atomistry » Iron » PDB 2r1m-2rfb » 2r5l
Atomistry »
  Iron »
    PDB 2r1m-2rfb »
      2r5l »

Iron in PDB 2r5l: Crystal Structure of Lactoperoxidase at 2.4A Resolution

Enzymatic activity of Crystal Structure of Lactoperoxidase at 2.4A Resolution

All present enzymatic activity of Crystal Structure of Lactoperoxidase at 2.4A Resolution:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of Lactoperoxidase at 2.4A Resolution, PDB code: 2r5l was solved by A.K.Singh, N.Singh, S.Sharma, P.Kaur, A.Srinivasan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.98 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.190, 80.810, 77.040, 90.00, 102.95, 90.00
R / Rfree (%) 19.6 / 20.3

Other elements in 2r5l:

The structure of Crystal Structure of Lactoperoxidase at 2.4A Resolution also contains other interesting chemical elements:

Iodine (I) 10 atoms
Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Lactoperoxidase at 2.4A Resolution (pdb code 2r5l). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Lactoperoxidase at 2.4A Resolution, PDB code: 2r5l:

Iron binding site 1 out of 1 in 2r5l

Go back to Iron Binding Sites List in 2r5l
Iron binding site 1 out of 1 in the Crystal Structure of Lactoperoxidase at 2.4A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Lactoperoxidase at 2.4A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe618

b:14.1
occ:1.00
FE A:HEM618 0.0 14.1 1.0
NB A:HEM618 2.0 15.2 1.0
NA A:HEM618 2.0 13.7 1.0
ND A:HEM618 2.1 12.1 1.0
NC A:HEM618 2.1 12.8 1.0
NE2 A:HIS351 2.1 15.0 1.0
O A:HOH1020 2.6 4.8 1.0
CD2 A:HIS351 3.0 13.7 1.0
C4B A:HEM618 3.0 13.5 1.0
C1A A:HEM618 3.0 14.6 1.0
C4D A:HEM618 3.1 13.3 1.0
C1B A:HEM618 3.1 13.5 1.0
C1D A:HEM618 3.1 12.3 1.0
C1C A:HEM618 3.1 11.6 1.0
C4A A:HEM618 3.1 15.0 1.0
C4C A:HEM618 3.1 10.1 1.0
CE1 A:HIS351 3.2 13.9 1.0
CHA A:HEM618 3.4 13.0 1.0
CHC A:HEM618 3.4 8.8 1.0
CHB A:HEM618 3.5 14.8 1.0
CHD A:HEM618 3.5 12.0 1.0
CG A:HIS351 4.2 14.1 1.0
C3B A:HEM618 4.3 12.6 1.0
C2B A:HEM618 4.3 12.8 1.0
C2A A:HEM618 4.3 14.3 1.0
ND1 A:HIS351 4.3 13.9 1.0
C2D A:HEM618 4.3 10.9 1.0
NE2 A:GLN105 4.3 6.9 1.0
C3D A:HEM618 4.3 13.2 1.0
C3A A:HEM618 4.3 14.5 1.0
C2C A:HEM618 4.3 11.0 1.0
C3C A:HEM618 4.4 10.7 1.0
CD2 A:LEU433 4.9 13.9 1.0
CG A:GLN105 5.0 7.4 1.0

Reference:

A.K.Singh, N.Singh, S.Sharma, S.B.Singh, P.Kaur, A.Bhushan, A.Srinivasan, T.P.Singh. Crystal Structure of Lactoperoxidase at 2.4 A Resolution. J.Mol.Biol. V. 376 1060 2007.
ISSN: ISSN 0022-2836
PubMed: 18191143
DOI: 10.1016/J.JMB.2007.12.012
Page generated: Sun Dec 13 14:52:28 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy