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Iron in PDB 2rom: Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide

Protein crystallography data

The structure of Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide, PDB code: 2rom was solved by S.-Y.Park, A.Nakagawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.140, 82.820, 87.170, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 26.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide (pdb code 2rom). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide, PDB code: 2rom:

Iron binding site 1 out of 1 in 2rom

Go back to Iron Binding Sites List in 2rom
Iron binding site 1 out of 1 in the Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Nitric Reductase From Denitrifying Fungus Fusarium Oxysporum Complex with Carbon Monoxide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:10.0
occ:1.00
FE A:HEM501 0.0 10.0 1.0
C A:CMO502 1.9 26.0 1.0
ND A:HEM501 2.0 7.3 1.0
NB A:HEM501 2.0 7.8 1.0
NA A:HEM501 2.0 10.0 1.0
NC A:HEM501 2.0 7.1 1.0
SG A:CYS352 2.6 6.4 1.0
C1D A:HEM501 3.0 9.3 1.0
O A:CMO502 3.0 23.6 1.0
C4C A:HEM501 3.0 6.4 1.0
C1B A:HEM501 3.0 8.8 1.0
C1A A:HEM501 3.0 5.5 1.0
C4D A:HEM501 3.0 6.7 1.0
C4B A:HEM501 3.0 7.9 1.0
C4A A:HEM501 3.0 10.7 1.0
C1C A:HEM501 3.0 7.4 1.0
CHD A:HEM501 3.3 7.7 1.0
CHB A:HEM501 3.4 9.7 1.0
CHA A:HEM501 3.4 8.8 1.0
CHC A:HEM501 3.4 8.9 1.0
CB A:CYS352 3.6 2.8 1.0
C2D A:HEM501 4.2 7.3 1.0
C3D A:HEM501 4.2 7.5 1.0
C2A A:HEM501 4.2 11.3 1.0
C3B A:HEM501 4.3 6.1 1.0
C2B A:HEM501 4.3 8.0 1.0
C3C A:HEM501 4.3 9.6 1.0
C2C A:HEM501 4.3 8.0 1.0
C3A A:HEM501 4.3 10.4 1.0
CA A:CYS352 4.4 5.5 1.0
CA A:GLY240 4.9 8.9 1.0
O A:HOH524 5.0 41.7 1.0

Reference:

S.Y.Park, H.Shimizu, S.Adachi, A.Nakagawa, I.Tanaka, K.Nakahara, H.Shoun, E.Obayashi, H.Nakamura, T.Iizuka, Y.Shiro. Crystal Structure of Nitric Oxide Reductase From Denitrifying Fungus Fusarium Oxysporum. Nat.Struct.Biol. V. 4 827 1997.
ISSN: ISSN 1072-8368
PubMed: 9334748
DOI: 10.1038/NSB1097-827
Page generated: Thu Jul 17 04:01:29 2025

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