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Iron in PDB 2v07: Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant

Protein crystallography data

The structure of Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant, PDB code: 2v07 was solved by J.A.R.Worrall, B.G.Schlarb-Ridley, T.Reda, M.J.Marcaida, R.J.Moorlen, J.Wastl, J.Hirst, D.S.Bendall, B.F.Luisi, C.J.Howe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.68 / 1.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 57.783, 57.783, 65.145, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 23.6

Iron Binding Sites:

The binding sites of Iron atom in the Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant (pdb code 2v07). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant, PDB code: 2v07:

Iron binding site 1 out of 1 in 2v07

Go back to Iron Binding Sites List in 2v07
Iron binding site 1 out of 1 in the Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of the Arabidopsis Thaliana Cytochrome C6A V52Q Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1102

b:9.6
occ:1.00
FE A:HEC1102 0.0 9.6 1.0
NE2 A:HIS20 2.0 7.2 1.0
ND A:HEC1102 2.0 9.6 1.0
NA A:HEC1102 2.0 9.6 1.0
NB A:HEC1102 2.0 7.8 1.0
NC A:HEC1102 2.0 8.1 1.0
SD A:MET60 2.3 13.3 1.0
CD2 A:HIS20 3.0 8.6 1.0
CE1 A:HIS20 3.0 8.6 1.0
C1D A:HEC1102 3.0 9.2 1.0
C1B A:HEC1102 3.0 8.2 1.0
C4C A:HEC1102 3.0 8.8 1.0
C4A A:HEC1102 3.0 10.3 1.0
C1C A:HEC1102 3.1 9.3 1.0
C4B A:HEC1102 3.1 8.0 1.0
C4D A:HEC1102 3.1 9.8 1.0
C1A A:HEC1102 3.1 8.0 1.0
CHD A:HEC1102 3.4 9.5 1.0
CE A:MET60 3.4 12.9 1.0
CHB A:HEC1102 3.4 9.8 1.0
CHC A:HEC1102 3.4 8.9 1.0
CHA A:HEC1102 3.4 10.8 1.0
CG A:MET60 3.6 13.8 1.0
ND1 A:HIS20 4.1 10.8 1.0
CB A:MET60 4.1 13.4 1.0
CG A:HIS20 4.1 9.8 1.0
C2B A:HEC1102 4.2 8.9 1.0
C3B A:HEC1102 4.3 8.7 1.0
C3C A:HEC1102 4.3 9.3 1.0
C2C A:HEC1102 4.3 7.6 1.0
C3A A:HEC1102 4.3 9.9 1.0
C2D A:HEC1102 4.3 9.3 1.0
C3D A:HEC1102 4.3 9.4 1.0
C2A A:HEC1102 4.3 9.8 1.0
CA A:MET60 4.7 13.4 1.0

Reference:

J.A.Worrall, B.G.Schlarb-Ridley, T.Reda, M.J.Marcaida, R.J.Moorlen, J.Wastl, J.Hirst, D.S.Bendall, B.F.Luisi, C.J.Howe. Modulation of Heme Redox Potential in the Cytochrome C6 Family. J. Am. Chem. Soc. V. 129 9468 2007.
ISSN: ISSN 0002-7863
PubMed: 17625855
DOI: 10.1021/JA072346G
Page generated: Thu Jul 17 04:05:51 2025

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