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Iron in PDB 2v1g: Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2

Protein crystallography data

The structure of Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2, PDB code: 2v1g was solved by H.-P.Hersleth, B.Dalhus, C.H.Gorbitz, K.K.Andersson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.81 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.862, 28.650, 35.352, 90.00, 105.93, 90.00
R / Rfree (%) 13.9 / 17.4

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2 (pdb code 2v1g). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2, PDB code: 2v1g:

Iron binding site 1 out of 1 in 2v1g

Go back to Iron Binding Sites List in 2v1g
Iron binding site 1 out of 1 in the Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Radiation-Induced Myoglobin Compound II - Intermediate H at pH 5.2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1154

b:8.3
occ:1.00
FE A:HEM1154 0.0 8.3 1.0
O A:OH1155 1.9 10.0 1.0
ND A:HEM1154 2.0 6.7 1.0
NC A:HEM1154 2.0 6.8 1.0
NA A:HEM1154 2.0 7.6 1.0
NB A:HEM1154 2.0 7.2 1.0
NE2 A:HIS93 2.1 7.3 1.0
C4C A:HEM1154 3.0 7.4 1.0
C1D A:HEM1154 3.0 6.8 1.0
C4D A:HEM1154 3.0 7.1 1.0
C1A A:HEM1154 3.1 6.7 1.0
C4A A:HEM1154 3.1 7.7 1.0
C1C A:HEM1154 3.1 6.8 1.0
C4B A:HEM1154 3.1 7.7 1.0
CE1 A:HIS93 3.1 9.3 1.0
C1B A:HEM1154 3.1 7.8 1.0
CD2 A:HIS93 3.1 7.6 1.0
CHD A:HEM1154 3.4 7.0 1.0
CHB A:HEM1154 3.4 6.8 1.0
CHC A:HEM1154 3.4 7.2 1.0
CHA A:HEM1154 3.4 6.8 1.0
ND1 A:HIS93 4.2 9.8 1.0
NE2 A:HIS64 4.2 9.4 1.0
CG A:HIS93 4.2 8.3 1.0
C3C A:HEM1154 4.2 7.5 1.0
C2D A:HEM1154 4.3 6.6 1.0
C2A A:HEM1154 4.3 6.9 1.0
C2C A:HEM1154 4.3 7.4 1.0
C3A A:HEM1154 4.3 7.5 1.0
C3D A:HEM1154 4.3 7.4 1.0
C3B A:HEM1154 4.3 7.2 1.0
C2B A:HEM1154 4.3 7.4 1.0
CG2 A:VAL68 4.6 8.2 1.0
CE1 A:HIS64 4.8 9.1 1.0
CZ A:PHE43 4.9 11.8 1.0

Reference:

H.-P.Hersleth, T.Uchida, A.K.Rohr, T.Teschner, V.Schunemann, T.Kitagawa, A.X.Trautwein, C.H.Gorbitz, K.K.Andersson. Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(IV)-O J.Biol.Chem. V. 282 23372 2007.
ISSN: ISSN 0021-9258
PubMed: 17565988
DOI: 10.1074/JBC.M701948200
Page generated: Sun Dec 13 14:53:22 2020

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