Iron in PDB 2v7i: Prnb Native

The structure of Prnb Native, PDB code: 2v7i was solved by J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	64.82 / 1.75
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	67.798, 80.120, 129.513, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 20.7

The binding sites of Iron atom in the Prnb Native (pdb code 2v7i). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Prnb Native, PDB code: 2v7i:

Iron binding site 1 out of 1 in the Prnb Native


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Prnb Native within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1362 b:28.9 occ:1.00 FE A:HEM1362 0.0 28.9 1.0 NA A:HEM1362 2.0 27.8 1.0 NE2 A:HIS313 2.0 28.3 1.0 NB A:HEM1362 2.1 27.6 1.0 NC A:HEM1362 2.1 27.6 1.0 ND A:HEM1362 2.1 27.9 1.0 O A:HOH2364 2.1 40.1 1.0 CE1 A:HIS313 2.9 26.2 1.0 C1A A:HEM1362 3.0 28.0 1.0 C4A A:HEM1362 3.0 27.9 1.0 C1B A:HEM1362 3.1 28.1 1.0 CD2 A:HIS313 3.1 26.8 1.0 C4D A:HEM1362 3.1 28.2 1.0 C4C A:HEM1362 3.1 27.7 1.0 C4B A:HEM1362 3.1 28.0 1.0 C1C A:HEM1362 3.1 28.0 1.0 C1D A:HEM1362 3.1 27.8 1.0 CHA A:HEM1362 3.4 27.9 1.0 CHB A:HEM1362 3.4 27.5 1.0 CHD A:HEM1362 3.5 27.9 1.0 CHC A:HEM1362 3.5 27.9 1.0 ND1 A:HIS313 4.0 26.1 1.0 CG A:HIS313 4.2 26.6 1.0 C2A A:HEM1362 4.2 28.0 1.0 C3A A:HEM1362 4.3 27.8 1.0 C2B A:HEM1362 4.3 27.8 1.0 C3C A:HEM1362 4.3 28.0 1.0 C2C A:HEM1362 4.3 27.8 1.0 C3B A:HEM1362 4.3 28.0 1.0 C3D A:HEM1362 4.3 27.6 1.0 C2D A:HEM1362 4.3 27.9 1.0 O A:HOH2271 4.3 27.5 1.0 CB A:ALA224 4.4 29.7 1.0 N A:VAL225 4.9 28.1 1.0

W.De Laurentis, L.Khim, J.L.R.Anderson, A.Adam, R.S.Phillips, S.K.Chapman, K.-H.Van Pee, J.H.Naismith. The Second Enzyme in Pyrrolnitrin Biosynthetic Pathway Is Related to the Heme-Dependent Dioxygenase Superfamily Biochemistry V. 46 12393 2007.
ISSN: ISSN 0006-2960
PubMed: 17924666
DOI: 10.1021/BI7012189