Iron in PDB 2v7k: Prnb D-Tryptophan Complex

The structure of Prnb D-Tryptophan Complex, PDB code: 2v7k was solved by J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	89.80 / 1.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	68.265, 79.546, 92.309, 90.00, 103.42, 90.00
R / Rfree (%)	18.3 / 20.6

The binding sites of Iron atom in the Prnb D-Tryptophan Complex (pdb code 2v7k). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Prnb D-Tryptophan Complex, PDB code: 2v7k:

Iron binding site 1 out of 1 in the Prnb D-Tryptophan Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Prnb D-Tryptophan Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1360 b:31.4 occ:1.00 FE A:HEM1360 0.0 31.4 1.0 NC A:HEM1360 2.0 30.4 1.0 NA A:HEM1360 2.0 30.7 1.0 NB A:HEM1360 2.1 30.5 1.0 NE2 A:HIS313 2.1 30.3 1.0 ND A:HEM1360 2.1 30.7 1.0 O A:DTR1361 2.3 25.1 1.0 CE1 A:HIS313 3.0 28.9 1.0 C1C A:HEM1360 3.0 30.8 1.0 C1A A:HEM1360 3.1 30.7 1.0 C4B A:HEM1360 3.1 30.8 1.0 C4A A:HEM1360 3.1 30.8 1.0 C4C A:HEM1360 3.1 30.8 1.0 C4D A:HEM1360 3.1 30.6 1.0 C1B A:HEM1360 3.1 30.9 1.0 CD2 A:HIS313 3.1 29.8 1.0 C1D A:HEM1360 3.1 30.8 1.0 C A:DTR1361 3.3 24.8 1.0 CHC A:HEM1360 3.4 30.4 1.0 CHA A:HEM1360 3.4 30.7 1.0 CHB A:HEM1360 3.4 30.7 1.0 CHD A:HEM1360 3.4 30.6 1.0 CA A:DTR1361 3.9 24.5 1.0 ND1 A:HIS313 4.1 29.6 1.0 CG A:HIS313 4.2 30.2 1.0 OXT A:DTR1361 4.2 25.1 1.0 C2A A:HEM1360 4.3 30.8 1.0 C3A A:HEM1360 4.3 30.6 1.0 C2C A:HEM1360 4.3 30.8 1.0 C3B A:HEM1360 4.3 30.5 1.0 C2B A:HEM1360 4.3 30.6 1.0 C3C A:HEM1360 4.3 30.7 1.0 C3D A:HEM1360 4.3 30.6 1.0 C2D A:HEM1360 4.3 30.5 1.0 CB A:DTR1361 4.4 23.8 1.0 CB A:ALA224 4.6 30.3 1.0 N A:VAL225 5.0 29.8 1.0

W.De Laurentis, L.Khim, J.L.R.Anderson, A.Adam, R.S.Phillips, S.K.Chapman, K.-H.Van Pee, J.H.Naismith. The Second Enzyme in Pyrrolnitrin Biosynthetic Pathway Is Related to the Heme-Dependent Dioxygenase Superfamily Biochemistry V. 46 12393 2007.
ISSN: ISSN 0006-2960
PubMed: 17924666
DOI: 10.1021/BI7012189