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Iron in PDB 2vlz: Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III

Protein crystallography data

The structure of Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III, PDB code: 2vlz was solved by H.-P.Hersleth, C.H.Gorbitz, K.K.Andersson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.87 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.804, 28.714, 35.452, 90.00, 105.82, 90.00
R / Rfree (%) 16.2 / 19

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III (pdb code 2vlz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III, PDB code: 2vlz:

Iron binding site 1 out of 1 in 2vlz

Go back to Iron Binding Sites List in 2vlz
Iron binding site 1 out of 1 in the Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Peroxymyoglobin Generated By Cryoradiolytic Reduction of Myoglobin Compound III within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1154

b:12.8
occ:1.00
FE A:HEM1154 0.0 12.8 1.0
O2 A:PER1155 1.8 15.9 1.0
ND A:HEM1154 2.0 11.4 1.0
NA A:HEM1154 2.0 12.2 1.0
NC A:HEM1154 2.0 11.2 1.0
NB A:HEM1154 2.0 12.6 1.0
NE2 A:HIS93 2.1 11.6 1.0
O1 A:PER1155 2.7 20.7 1.0
CE1 A:HIS93 3.0 14.1 1.0
C1D A:HEM1154 3.0 11.1 1.0
C4C A:HEM1154 3.1 11.4 1.0
C1A A:HEM1154 3.1 12.7 1.0
C4D A:HEM1154 3.1 11.4 1.0
C1B A:HEM1154 3.1 11.0 1.0
C4A A:HEM1154 3.1 12.3 1.0
C1C A:HEM1154 3.1 9.7 1.0
C4B A:HEM1154 3.1 12.3 1.0
CD2 A:HIS93 3.1 12.8 1.0
CHD A:HEM1154 3.4 11.4 1.0
CHA A:HEM1154 3.4 11.9 1.0
CHB A:HEM1154 3.4 12.2 1.0
CHC A:HEM1154 3.5 11.7 1.0
ND1 A:HIS93 4.2 14.3 1.0
CG A:HIS93 4.3 13.2 1.0
C2A A:HEM1154 4.3 11.9 1.0
C2D A:HEM1154 4.3 11.8 1.0
C3A A:HEM1154 4.3 12.3 1.0
C2B A:HEM1154 4.3 12.3 1.0
C2C A:HEM1154 4.3 10.7 1.0
C3D A:HEM1154 4.3 12.6 1.0
C3B A:HEM1154 4.3 10.9 1.0
C3C A:HEM1154 4.3 11.4 1.0
NE2 A:HIS64 4.6 15.7 1.0
CG2 A:VAL68 4.6 10.5 1.0
CE1 A:HIS64 4.9 16.6 1.0

Reference:

H.-P.Hersleth, Y.Hsiao, U.Ryde, C.H.Gorbitz, K.K.Andersson. The Crystal Structure of Peroxymyoglobin Generated Through Cryoradiolytic Reduction of Myoglobin Compound III During Data Collection. Biochem.J. V. 412 257 2008.
ISSN: ISSN 0264-6021
PubMed: 18215120
DOI: 10.1042/BJ20070921
Page generated: Sun Dec 13 14:53:57 2020

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