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Iron in PDB 2wiy: Cytochrome P450 Xpla Heme Domain P21212

Protein crystallography data

The structure of Cytochrome P450 Xpla Heme Domain P21212, PDB code: 2wiy was solved by F.Sabbadin, R.Jackson, N.C.Bruce, G.Grogan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 124.03 / 1.49
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 124.293, 64.677, 54.048, 90.00, 90.00, 90.00
R / Rfree (%) 14.7 / 17.8

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome P450 Xpla Heme Domain P21212 (pdb code 2wiy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome P450 Xpla Heme Domain P21212, PDB code: 2wiy:

Iron binding site 1 out of 1 in 2wiy

Go back to Iron Binding Sites List in 2wiy
Iron binding site 1 out of 1 in the Cytochrome P450 Xpla Heme Domain P21212


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome P450 Xpla Heme Domain P21212 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1560

b:5.6
occ:1.00
FE A:HEM1560 0.0 5.6 1.0
NC A:HEM1560 2.0 5.2 1.0
NB A:HEM1560 2.0 4.2 1.0
ND A:HEM1560 2.0 3.4 1.0
NA A:HEM1560 2.0 4.7 1.0
N1 A:IMD1553 2.2 13.5 1.0
SG A:CYS503 2.4 5.6 1.0
C4B A:HEM1560 3.1 4.7 1.0
C1C A:HEM1560 3.1 3.4 1.0
C4C A:HEM1560 3.1 4.5 1.0
C4D A:HEM1560 3.1 4.7 1.0
C1D A:HEM1560 3.1 4.1 1.0
C1B A:HEM1560 3.1 5.7 1.0
C1A A:HEM1560 3.1 3.6 1.0
C4A A:HEM1560 3.1 4.4 1.0
C5 A:IMD1553 3.2 18.5 1.0
C2 A:IMD1553 3.2 22.9 1.0
CHC A:HEM1560 3.4 5.3 1.0
CB A:CYS503 3.4 4.3 1.0
CHD A:HEM1560 3.4 6.0 1.0
CHA A:HEM1560 3.5 4.7 1.0
CHB A:HEM1560 3.5 5.8 1.0
CA A:CYS503 4.0 4.3 1.0
C3D A:HEM1560 4.3 4.2 1.0
C3C A:HEM1560 4.3 5.1 1.0
C3B A:HEM1560 4.3 5.3 1.0
C2C A:HEM1560 4.3 4.5 1.0
C2D A:HEM1560 4.3 4.6 1.0
N3 A:IMD1553 4.3 25.0 1.0
C2B A:HEM1560 4.3 6.3 1.0
C3A A:HEM1560 4.3 6.5 1.0
C2A A:HEM1560 4.3 6.0 1.0
C4 A:IMD1553 4.3 15.2 1.0
N A:ALA504 4.6 4.1 1.0
N A:GLY505 4.6 4.0 1.0
C A:CYS503 4.7 4.4 1.0

Reference:

F.Sabbadin, R.Jackson, K.Haider, G.Tampi, J.P.Turkenburg, S.Hart, N.C.Bruce, G.Grogan. The 1.5-A Structure of Xpla-Heme, An Unusual Cytochrome P450 Heme Domain That Catalyzes Reductive Biotransformation of Royal Demolition Explosive. J.Biol.Chem. V. 284 28467 2009.
ISSN: ISSN 0021-9258
PubMed: 19692330
DOI: 10.1074/JBC.M109.031559
Page generated: Thu Jul 17 05:04:23 2025

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