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Iron in PDB 2wo7: Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed)

Enzymatic activity of Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed)

All present enzymatic activity of Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed):
1.21.3.1;

Protein crystallography data

The structure of Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed), PDB code: 2wo7 was solved by W.Ge, I.J.Clifton, R.M.Adlington, J.E.Baldwin, P.J.Rutledge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.75 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.484, 75.935, 101.016, 90.00, 90.00, 90.00
R / Rfree (%) 18.605 / 25.684

Iron Binding Sites:

The binding sites of Iron atom in the Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed) (pdb code 2wo7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed), PDB code: 2wo7:

Iron binding site 1 out of 1 in 2wo7

Go back to Iron Binding Sites List in 2wo7
Iron binding site 1 out of 1 in the Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Isopenicillin N Synthase with Substrate Analogue L,L,D- ACD2AB (Unexposed) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1332

b:11.1
occ:1.00
OD1 A:ASP216 2.2 11.7 1.0
NE2 A:HIS214 2.2 9.1 1.0
O A:HOH2300 2.3 13.7 1.0
NE2 A:HIS270 2.3 8.0 1.0
O A:HOH2216 2.3 10.0 1.0
S17 A:ASV1333 2.4 16.8 1.0
CD2 A:HIS214 3.1 8.0 1.0
CD2 A:HIS270 3.2 7.9 1.0
CG A:ASP216 3.2 9.4 1.0
CE1 A:HIS214 3.3 10.2 1.0
CE1 A:HIS270 3.3 6.8 1.0
C16 A:ASV1333 3.3 17.0 1.0
OD2 A:ASP216 3.6 9.1 1.0
C33 A:ASV1333 3.8 21.8 1.0
O A:HOH2249 4.1 15.9 1.0
N29 A:ASV1333 4.2 23.2 1.0
CG A:HIS214 4.3 8.9 1.0
CG A:HIS270 4.3 7.6 1.0
ND1 A:HIS214 4.3 10.3 1.0
ND1 A:HIS270 4.4 7.1 1.0
C32 A:ASV1333 4.5 22.9 1.0
CB A:ASP216 4.5 8.2 1.0
O A:HOH2217 4.6 15.8 1.0
C12 A:ASV1333 4.7 19.8 1.0
CA A:ASP216 4.8 8.6 1.0
C13 A:ASV1333 4.9 23.5 1.0
N A:ASP216 5.0 9.2 1.0
C30 A:ASV1333 5.0 23.2 1.0

Reference:

W.Ge, I.J.Clifton, J.E.Stok, R.M.Adlington, J.E.Baldwin, P.J.Rutledge. Crystallographic Studies on the Binding of Selectively Deuterated Lld- and Lll-Substrate Epimers By Isopenicillin N Synthase. Biochem.Biophys.Res.Commun. V. 398 659 2010.
ISSN: ISSN 0006-291X
PubMed: 20603104
DOI: 10.1016/J.BBRC.2010.06.129
Page generated: Sun Aug 4 04:04:44 2024

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