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Iron in PDB 2wtg: High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1

Protein crystallography data

The structure of High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1, PDB code: 2wtg was solved by E.Geuens, D.Hoogewijs, M.Nardini, E.Vinck, A.Pesce, L.Kiger, A.Fago, L.Tilleman, S.De Henau, M.Marden, R.E.Weber, S.Van Doorslaer, J.Vanfleteren, L.Moens, M.Bolognesi, S.Dewilde, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.64 / 1.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.947, 81.947, 47.042, 90.00, 90.00, 90.00
R / Rfree (%) 16.318 / 20.118

Iron Binding Sites:

The binding sites of Iron atom in the High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1 (pdb code 2wtg). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1, PDB code: 2wtg:

Iron binding site 1 out of 1 in 2wtg

Go back to Iron Binding Sites List in 2wtg
Iron binding site 1 out of 1 in the High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of High Resolution 3D Structure of C.Elegans Globin-Like Protein Glb-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe180

b:10.1
occ:1.00
FE A:HEM180 0.0 10.1 1.0
NA A:HEM180 2.0 9.6 1.0
NC A:HEM180 2.0 9.0 1.0
ND A:HEM180 2.0 9.5 1.0
NB A:HEM180 2.1 9.8 1.0
NE2 A:HIS101 2.1 9.0 1.0
O2 A:OXY350 2.1 11.8 1.0
CE1 A:HIS101 3.0 9.9 1.0
C1A A:HEM180 3.1 11.0 1.0
C4D A:HEM180 3.1 8.9 1.0
C4A A:HEM180 3.1 10.3 1.0
C4C A:HEM180 3.1 9.9 1.0
C4B A:HEM180 3.1 10.1 1.0
C1C A:HEM180 3.1 10.1 1.0
C1B A:HEM180 3.1 10.8 1.0
C1D A:HEM180 3.1 8.6 1.0
CD2 A:HIS101 3.1 9.1 1.0
O1 A:OXY350 3.2 21.4 1.0
CHA A:HEM180 3.4 10.8 1.0
CHC A:HEM180 3.4 11.0 1.0
CHB A:HEM180 3.4 11.5 1.0
CHD A:HEM180 3.4 10.1 1.0
ND1 A:HIS101 4.1 9.0 1.0
CG A:HIS101 4.2 9.2 1.0
C3A A:HEM180 4.3 11.4 1.0
C2A A:HEM180 4.3 11.6 1.0
C3C A:HEM180 4.3 9.8 1.0
C2C A:HEM180 4.3 9.6 1.0
C2B A:HEM180 4.3 11.7 1.0
C3D A:HEM180 4.3 9.6 1.0
C3B A:HEM180 4.3 12.1 1.0
C2D A:HEM180 4.3 9.1 1.0
CD1 A:ILE73 4.7 12.6 1.0
NE2 A:GLN69 4.9 12.9 1.0

Reference:

E.Geuens, D.Hoogewijs, M.Nardini, E.Vinck, A.Pesce, L.Kiger, A.Fago, L.Tilleman, S.De Henau, M.Marden, R.E.Weber, S.Van Doorslaer, J.Vanfleteren, L.Moens, M.Bolognesi, S.De Wilde. Globin-Like Proteins in Caenorhabditis Elegans: in Vivo Localization, Ligand Binding and Structural Properties. Bmc Biochem. V. 11 17 2010.
ISSN: ISSN 1471-2091
PubMed: 20361867
DOI: 10.1186/1471-2091-11-17
Page generated: Sun Dec 13 14:55:57 2020

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