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Iron in PDB 2wy4: Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution

Protein crystallography data

The structure of Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution, PDB code: 2wy4 was solved by V.V.Barynin, S.E.Sedelnikova, M.Shepherd, G.Wu, R.K.Poole, D.W.Rice, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.550, 37.980, 43.760, 90.00, 102.68, 90.00
R / Rfree (%) 17.808 / 20.887

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution (pdb code 2wy4). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution, PDB code: 2wy4:

Iron binding site 1 out of 1 in 2wy4

Go back to Iron Binding Sites List in 2wy4
Iron binding site 1 out of 1 in the Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Bacterial Globin From Campylobacter Jejuni at 1.35 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe150

b:12.8
occ:1.00
FE A:HEM150 0.0 12.8 1.0
NA A:HEM150 2.0 11.0 1.0
C A:CYN151 2.0 11.6 1.0
NB A:HEM150 2.0 11.5 1.0
NC A:HEM150 2.0 12.1 1.0
ND A:HEM150 2.0 12.3 1.0
NE2 A:HIS84 2.1 11.5 1.0
CE1 A:HIS84 3.0 12.5 1.0
C4C A:HEM150 3.0 11.7 1.0
C4A A:HEM150 3.0 11.1 1.0
C1A A:HEM150 3.0 10.3 1.0
C1D A:HEM150 3.0 11.9 1.0
C1B A:HEM150 3.0 11.7 1.0
C4B A:HEM150 3.0 12.2 1.0
C4D A:HEM150 3.1 11.5 1.0
C1C A:HEM150 3.1 11.6 1.0
CD2 A:HIS84 3.1 13.5 1.0
N A:CYN151 3.2 14.1 1.0
CHA A:HEM150 3.4 10.9 1.0
CHC A:HEM150 3.4 12.0 1.0
CHB A:HEM150 3.4 10.6 1.0
CHD A:HEM150 3.4 10.3 1.0
ND1 A:HIS84 4.1 12.0 1.0
CG A:HIS84 4.2 13.5 1.0
C3C A:HEM150 4.2 13.1 1.0
C2A A:HEM150 4.2 11.2 1.0
C3B A:HEM150 4.2 11.1 1.0
C2B A:HEM150 4.2 11.7 1.0
C2C A:HEM150 4.3 12.4 1.0
C2D A:HEM150 4.3 12.1 1.0
C3A A:HEM150 4.3 11.4 1.0
C3D A:HEM150 4.3 11.7 1.0
NE2 A:GLN52 4.9 12.6 1.0
CG1 A:VAL80 5.0 13.1 1.0

Reference:

M.Shepherd, V.V.Barynin, C.Lu, P.V.Bernhardt, G.Wu, S.R.Yeh, T.Egawa, S.E.Sedelnikova, D.W.Rice, J.L.Wilson, R.K.Poole. The Single-Domain Globin From the Pathogenic Bacterium Campylobacter Jejuni: Novel D-Helix Conformation, Proximal Hydrogen Bonding That Influences Ligand Binding, and Peroxidase-Like Redox Properties. J.Biol.Chem. V. 285 12747 2010.
ISSN: ISSN 0021-9258
PubMed: 20164176
DOI: 10.1074/JBC.M109.084509
Page generated: Sun Dec 13 14:56:08 2020

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