Iron in PDB 2z36: Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105)

The structure of Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105), PDB code: 2z36 was solved by Y.Yasutake, Y.Fujii, T.Fujii, A.Arisawa, T.Tamura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.60 / 2.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	81.557, 83.256, 175.851, 90.00, 90.00, 90.00
R / Rfree (%)	23 / 27.4

The binding sites of Iron atom in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) (pdb code 2z36). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105), PDB code: 2z36:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe602 b:43.6 occ:1.00 NE2 A:HIS410 2.2 71.8 1.0 NE2 A:HIS412 2.4 46.6 1.0 CE1 A:HIS410 2.9 72.8 1.0 CE1 A:HIS412 2.9 51.6 1.0 CD2 A:HIS410 3.2 73.6 1.0 CD2 A:HIS412 3.5 59.6 1.0 ND1 A:HIS410 4.0 76.2 1.0 ND1 A:HIS412 4.1 60.0 1.0 CG A:HIS410 4.1 73.3 1.0 CG A:HIS412 4.4 62.1 1.0

Iron binding site 2 out of 4 in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe450 b:31.4 occ:1.00 FE A:HEM450 0.0 31.4 1.0 NC A:HEM450 1.9 26.1 1.0 ND A:HEM450 1.9 28.2 1.0 NA A:HEM450 2.0 31.6 1.0 NB A:HEM450 2.0 33.0 1.0 SG A:CYS356 2.6 37.7 1.0 C1D A:HEM450 2.9 29.0 1.0 C1C A:HEM450 3.0 24.5 1.0 C4B A:HEM450 3.0 30.9 1.0 C4C A:HEM450 3.0 25.9 1.0 C4D A:HEM450 3.0 28.1 1.0 C1B A:HEM450 3.0 29.2 1.0 C4A A:HEM450 3.0 32.4 1.0 C1A A:HEM450 3.0 30.9 1.0 CHC A:HEM450 3.3 23.0 1.0 CHD A:HEM450 3.3 25.9 1.0 CHB A:HEM450 3.4 36.8 1.0 CHA A:HEM450 3.4 24.5 1.0 O A:ALA245 3.6 30.4 1.0 CB A:CYS356 3.6 37.1 1.0 C2C A:HEM450 4.2 26.4 1.0 CA A:CYS356 4.2 32.2 1.0 C3C A:HEM450 4.2 29.4 1.0 C2D A:HEM450 4.2 24.6 1.0 C2B A:HEM450 4.2 29.1 1.0 C3A A:HEM450 4.2 29.0 1.0 C3D A:HEM450 4.2 20.5 1.0 C2A A:HEM450 4.2 28.2 1.0 C3B A:HEM450 4.3 34.4 1.0 O1 A:MES4574 4.4 79.6 1.0 CB A:ALA245 4.5 39.6 1.0 C6 A:MES4574 4.5 83.1 1.0 C A:ALA245 4.6 30.2 1.0 N A:LEU357 4.8 30.9 1.0 C A:CYS356 4.9 33.2 1.0

Iron binding site 3 out of 4 in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe601 b:51.1 occ:1.00 NE2 B:HIS410 2.3 85.5 1.0 NE2 B:HIS412 2.3 64.5 1.0 CE1 B:HIS412 2.5 68.4 1.0 CE1 B:HIS410 2.9 84.3 1.0 CD2 B:HIS410 3.3 85.4 1.0 CD2 B:HIS412 3.5 72.5 1.0 ND1 B:HIS412 3.7 73.5 1.0 ND1 B:HIS410 4.0 83.0 1.0 CG B:HIS412 4.1 75.5 1.0 CG B:HIS410 4.2 83.9 1.0

Iron binding site 4 out of 4 in the Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe460 b:30.2 occ:1.00 FE B:HEM460 0.0 30.2 1.0 NC B:HEM460 1.9 27.9 1.0 ND B:HEM460 2.0 25.8 1.0 NB B:HEM460 2.0 29.6 1.0 NA B:HEM460 2.0 26.2 1.0 SG B:CYS356 2.6 31.1 1.0 C1C B:HEM460 2.9 29.9 1.0 C1D B:HEM460 2.9 28.9 1.0 C4B B:HEM460 3.0 28.3 1.0 C4C B:HEM460 3.0 30.9 1.0 C1B B:HEM460 3.0 28.1 1.0 C4D B:HEM460 3.0 24.5 1.0 C4A B:HEM460 3.0 22.4 1.0 C1A B:HEM460 3.0 25.6 1.0 CHC B:HEM460 3.3 29.2 1.0 CHD B:HEM460 3.3 28.7 1.0 CHB B:HEM460 3.4 26.5 1.0 CHA B:HEM460 3.4 24.1 1.0 CB B:CYS356 3.6 29.7 1.0 O B:ALA245 3.7 36.9 1.0 C2C B:HEM460 4.1 24.1 1.0 CA B:CYS356 4.2 32.3 1.0 C3C B:HEM460 4.2 29.1 1.0 C2B B:HEM460 4.2 20.7 1.0 C2D B:HEM460 4.2 21.3 1.0 C3A B:HEM460 4.3 24.9 1.0 C3D B:HEM460 4.3 22.4 1.0 C2A B:HEM460 4.3 22.5 1.0 C3B B:HEM460 4.3 27.5 1.0 C6 B:MES4575 4.5 88.3 1.0 CB B:ALA245 4.6 39.9 1.0 O1 B:MES4575 4.6 85.0 1.0 C B:ALA245 4.7 34.8 1.0 N B:LEU357 4.8 37.5 1.0 C B:CYS356 4.9 33.8 1.0

Y.Yasutake, N.Imoto, Y.Fujii, T.Fujii, A.Arisawa, T.Tamura. Crystal Structure of Cytochrome P450 Moxa From Nonomuraea Recticatena (CYP105) Biochem.Biophys.Res.Commun. V. 361 876 2007.
ISSN: ISSN 0006-291X
PubMed: 17679139
DOI: 10.1016/J.BBRC.2007.07.062