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Iron in PDB 2z3u: Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1)

Protein crystallography data

The structure of Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1), PDB code: 2z3u was solved by M.Makino, H.Sugimoto, Y.Shiro, S.Asamizu, H.Onaka, S.Nagano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.96 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.627, 66.610, 136.813, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 23.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1) (pdb code 2z3u). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1), PDB code: 2z3u:

Iron binding site 1 out of 1 in 2z3u

Go back to Iron Binding Sites List in 2z3u
Iron binding site 1 out of 1 in the Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 Stap (CYP245A1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:10.5
occ:1.00
FE A:HEM500 0.0 10.5 1.0
NB A:HEM500 2.0 10.3 1.0
ND A:HEM500 2.0 13.8 1.0
NA A:HEM500 2.1 11.1 1.0
NC A:HEM500 2.2 14.0 1.0
SG A:CYS364 2.4 14.4 1.0
C4D A:HEM500 3.0 14.1 1.0
C1B A:HEM500 3.1 10.5 1.0
C4B A:HEM500 3.1 10.1 1.0
C1A A:HEM500 3.1 15.5 1.0
C1D A:HEM500 3.1 15.1 1.0
C4A A:HEM500 3.1 14.9 1.0
C1C A:HEM500 3.2 14.0 1.0
C4C A:HEM500 3.2 14.0 1.0
CB A:CYS364 3.4 18.4 1.0
CHA A:HEM500 3.4 15.2 1.0
CHC A:HEM500 3.4 9.1 1.0
CHB A:HEM500 3.5 10.1 1.0
CHD A:HEM500 3.5 15.9 1.0
CA A:CYS364 4.0 19.1 1.0
C3D A:HEM500 4.3 14.3 1.0
C2B A:HEM500 4.3 11.9 1.0
C2D A:HEM500 4.3 17.8 1.0
C3B A:HEM500 4.3 12.2 1.0
C2A A:HEM500 4.4 17.7 1.0
C3A A:HEM500 4.4 17.3 1.0
O A:ALA254 4.4 16.7 1.0
C2C A:HEM500 4.4 14.8 1.0
C3C A:HEM500 4.5 16.7 1.0
N A:LEU365 4.5 18.6 1.0
C A:CYS364 4.6 18.8 1.0
C15 A:CRR501 4.7 18.7 1.0
N A:GLY366 4.7 18.7 1.0
OG1 A:THR258 4.9 30.7 1.0

Reference:

M.Makino, H.Sugimoto, Y.Shiro, S.Asamizu, H.Onaka, S.Nagano. Crystal Structures and Catalytic Mechanism of Cytochrome P450 Stap That Produces the Indolocarbazole Skeleton Proc.Natl.Acad.Sci.Usa V. 104 11591 2007.
ISSN: ISSN 0027-8424
PubMed: 17606921
DOI: 10.1073/PNAS.0702946104
Page generated: Sun Dec 13 14:58:35 2020

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