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Iron in PDB 2zxy: Crystal Structure of Cytochrome C555 From Aquifex Aeolicus

Protein crystallography data

The structure of Crystal Structure of Cytochrome C555 From Aquifex Aeolicus, PDB code: 2zxy was solved by M.Obuchi, K.Kawahara, D.Motooka, S.Nakamura, M.Yamanaka, T.Takeda, S.Uchiyama, Y.Kobayashi, T.Ohkubo, Y.Sambongi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.92 / 1.15
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 48.529, 32.993, 49.668, 90.00, 115.05, 90.00
R / Rfree (%) 12.7 / 16.4

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Cytochrome C555 From Aquifex Aeolicus (pdb code 2zxy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome C555 From Aquifex Aeolicus, PDB code: 2zxy:

Iron binding site 1 out of 1 in 2zxy

Go back to Iron Binding Sites List in 2zxy
Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome C555 From Aquifex Aeolicus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome C555 From Aquifex Aeolicus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:3.0
occ:1.00
FE A:HEC200 0.0 3.0 1.0
NE2 A:HIS16 2.0 3.3 1.0
NB A:HEC200 2.0 3.9 1.0
NC A:HEC200 2.0 3.8 1.0
NA A:HEC200 2.0 3.6 1.0
ND A:HEC200 2.0 4.0 1.0
SD A:MET61 2.3 3.5 1.0
CE1 A:HIS16 2.9 3.5 1.0
C1B A:HEC200 3.0 3.5 1.0
C4A A:HEC200 3.0 3.2 1.0
CD2 A:HIS16 3.0 3.9 1.0
C4B A:HEC200 3.0 3.1 1.0
C4C A:HEC200 3.0 3.7 1.0
C1D A:HEC200 3.0 3.5 1.0
C1C A:HEC200 3.0 3.5 1.0
C1A A:HEC200 3.1 3.1 1.0
C4D A:HEC200 3.1 3.8 1.0
CE A:MET61 3.3 4.9 1.0
CHB A:HEC200 3.4 3.6 1.0
CHD A:HEC200 3.4 4.0 1.0
CHC A:HEC200 3.4 3.9 1.0
CG A:MET61 3.4 4.2 1.0
CHA A:HEC200 3.4 3.7 1.0
ND1 A:HIS16 4.1 4.0 1.0
CG A:HIS16 4.1 3.9 1.0
CB A:MET61 4.2 4.8 1.0
C3B A:HEC200 4.3 3.9 1.0
C2B A:HEC200 4.3 4.1 1.0
C3A A:HEC200 4.3 3.4 1.0
C3C A:HEC200 4.3 4.2 1.0
C2C A:HEC200 4.3 4.3 1.0
C2A A:HEC200 4.3 3.4 1.0
C2D A:HEC200 4.3 5.0 1.0
C3D A:HEC200 4.3 4.3 1.0
CA A:MET61 4.9 5.2 1.0

Reference:

M.Obuchi, K.Kawahara, D.Motooka, S.Nakamura, M.Yamanaka, T.Takeda, S.Uchiyama, Y.Kobayashi, T.Ohkubo, Y.Sambongi. Hyperstability and Crystal Structure of Cytochrome C(555) From Hyperthermophilic Aquifex Aeolicus Acta Crystallogr.,Sect.D V. 65 804 2009.
ISSN: ISSN 0907-4449
PubMed: 19622864
DOI: 10.1107/S0907444909017314
Page generated: Sun Aug 4 06:24:41 2024

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