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Iron in PDB 3a17: Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Enzymatic activity of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
All present enzymatic activity of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal):
4.99.1.5;
4.99.1.5;
Protein crystallography data
The structure of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal), PDB code: 3a17
was solved by
H.Sawai,
H.Sugimoto,
Y.Kato,
Y.Asano,
Y.Shiro,
S.Aono,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.90 / 2.50 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 80.052, 103.931, 114.189, 76.50, 89.46, 87.55 |
| R / Rfree (%) | 21.1 / 24.3 |
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
(pdb code 3a17). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal), PDB code: 3a17:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Iron where determined in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal), PDB code: 3a17:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Iron binding site 1 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 1 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 2 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 2 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 3 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 3 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 4 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 4 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 5 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 5 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 6 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 6 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 7 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 7 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Iron binding site 8 out of 8 in 3a17
Go back to
Iron Binding Sites List in 3a17
Iron binding site 8 out
of 8 in the Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of Aldoxime Dehydratase (Oxdre) in Complex with Butyraldoxime (Co-Crystal) within 5.0Å range:
|
Reference:
H.Sawai,
H.Sugimoto,
Y.Kato,
Y.Asano,
Y.Shiro,
S.Aono.
X-Ray Crystal Structure of Michaelis Complex of Aldoxime Dehydratase J.Biol.Chem. V. 284 32089 2009.
ISSN: ISSN 0021-9258
PubMed: 19740758
DOI: 10.1074/JBC.M109.018762
Page generated: Sun Aug 4 06:38:45 2024
ISSN: ISSN 0021-9258
PubMed: 19740758
DOI: 10.1074/JBC.M109.018762
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