Atomistry » Iron » PDB 3ark-3b99 » 3azc
Atomistry »
  Iron »
    PDB 3ark-3b99 »
      3azc »

Iron in PDB 3azc: Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1

Enzymatic activity of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1

All present enzymatic activity of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1:
1.10.99.1;

Protein crystallography data

The structure of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1, PDB code: 3azc was solved by S.Veit, K.Takeda, Y.Tsunoyama, M.Roegner, K.Miki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.61 / 2.00
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 91.324, 91.324, 43.342, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 23.6

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 (pdb code 3azc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1, PDB code: 3azc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3azc

Go back to Iron Binding Sites List in 3azc
Iron binding site 1 out of 2 in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:49.0
occ:1.00
FE1 A:FES201 0.0 49.0 1.0
S2 A:FES201 2.3 47.3 1.0
S1 A:FES201 2.3 46.8 1.0
SG A:CYS126 2.3 47.5 1.0
SG A:CYS108 2.3 45.8 1.0
FE2 A:FES201 2.7 50.4 1.0
CB A:CYS126 3.1 39.4 1.0
CB A:CYS108 3.2 45.1 1.0
CB A:HIS110 4.1 61.4 1.0
ND1 A:HIS110 4.3 64.2 1.0
CB A:CYS128 4.3 48.9 1.0
OG A:SER131 4.3 44.3 1.0
CB A:CYS113 4.3 47.6 1.0
CB A:SER131 4.4 46.8 1.0
N A:HIS129 4.5 56.1 1.0
ND1 A:HIS129 4.5 65.5 1.0
CA A:CYS126 4.6 41.2 1.0
CG A:HIS110 4.6 60.9 1.0
CA A:CYS108 4.6 37.2 1.0
N A:LEU111 4.7 51.5 1.0
N A:CYS113 4.9 52.1 1.0
N A:SER131 5.0 50.1 1.0
C A:CYS126 5.0 48.1 1.0

Iron binding site 2 out of 2 in 3azc

Go back to Iron Binding Sites List in 3azc
Iron binding site 2 out of 2 in the Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Soluble Part of Cytochrome B6F Complex Iron- Sulfur Subunit From Thermosynechococcus Elongatus Bp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:50.4
occ:1.00
FE2 A:FES201 0.0 50.4 1.0
ND1 A:HIS110 2.1 64.2 1.0
ND1 A:HIS129 2.1 65.5 1.0
S1 A:FES201 2.2 46.8 1.0
S2 A:FES201 2.2 47.3 1.0
FE1 A:FES201 2.7 49.0 1.0
CE1 A:HIS110 3.0 62.9 1.0
CG A:HIS129 3.0 52.9 1.0
CG A:HIS110 3.1 60.9 1.0
CE1 A:HIS129 3.1 54.1 1.0
CB A:HIS129 3.3 50.9 1.0
CB A:HIS110 3.5 61.4 1.0
N A:HIS129 3.7 56.1 1.0
CB A:CYS128 4.0 48.9 1.0
CA A:HIS129 4.1 46.4 1.0
N A:LEU111 4.1 51.5 1.0
NE2 A:HIS110 4.1 69.2 1.0
CD2 A:HIS129 4.2 54.0 1.0
CD2 A:HIS110 4.2 64.1 1.0
NE2 A:HIS129 4.2 55.5 1.0
CB A:LEU111 4.2 67.2 1.0
C A:CYS128 4.4 60.5 1.0
SG A:CYS108 4.4 45.8 1.0
SG A:CYS126 4.4 47.5 1.0
CG A:PRO143 4.7 37.5 1.0
CA A:LEU111 4.7 50.0 1.0
CA A:HIS110 4.8 49.5 1.0
C A:HIS110 4.8 53.1 1.0
CA A:CYS128 4.8 55.0 1.0
OG A:SER131 4.8 44.3 1.0
C A:HIS129 4.8 47.5 1.0
CD2 A:LEU111 4.9 72.2 1.0

Reference:

S.Veit, K.Takeda, Y.Tsunoyama, D.Rexroth, M.Rogner, K.Miki. Structure of A Thermophilic Cyanobacterial B(6)F-Type Rieske Protein Acta Crystallogr.,Sect.D V. 68 1400 2012.
ISSN: ISSN 0907-4449
PubMed: 22993094
DOI: 10.1107/S0907444912034129
Page generated: Sun Aug 4 07:26:59 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy