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Iron in PDB 3cp5: Cytochrome C From Rhodothermus Marinus

Protein crystallography data

The structure of Cytochrome C From Rhodothermus Marinus, PDB code: 3cp5 was solved by M.Stelter, A.Melo, L.Saraiva, M.Teixeira, M.Archer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.24
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.592, 32.644, 42.064, 90.00, 94.56, 90.00
R / Rfree (%) 13 / 17.4

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C From Rhodothermus Marinus (pdb code 3cp5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome C From Rhodothermus Marinus, PDB code: 3cp5:

Iron binding site 1 out of 1 in 3cp5

Go back to Iron Binding Sites List in 3cp5
Iron binding site 1 out of 1 in the Cytochrome C From Rhodothermus Marinus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C From Rhodothermus Marinus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe202

b:7.7
occ:1.00
FE A:HEC202 0.0 7.7 1.0
NA A:HEC202 2.0 8.2 1.0
NC A:HEC202 2.0 7.1 1.0
ND A:HEC202 2.0 8.3 1.0
NB A:HEC202 2.0 7.3 1.0
NE2 A:HIS49 2.0 7.1 1.0
SD A:MET100 2.3 8.7 1.0
CE1 A:HIS49 3.0 8.8 1.0
C1B A:HEC202 3.0 7.1 1.0
C4A A:HEC202 3.0 6.6 1.0
C1D A:HEC202 3.0 8.6 1.0
C4D A:HEC202 3.0 8.6 1.0
CD2 A:HIS49 3.0 7.9 1.0
C1A A:HEC202 3.1 7.7 1.0
C4B A:HEC202 3.1 6.3 1.0
C4C A:HEC202 3.1 8.4 1.0
C1C A:HEC202 3.1 7.6 1.0
CE A:MET100 3.3 9.4 1.0
CHD A:HEC202 3.4 8.1 1.0
CHB A:HEC202 3.4 6.7 1.0
CHA A:HEC202 3.4 7.6 1.0
CHC A:HEC202 3.4 7.2 1.0
CG A:MET100 3.4 13.4 1.0
ND1 A:HIS49 4.2 7.8 1.0
CG A:HIS49 4.2 7.4 1.0
C2B A:HEC202 4.2 7.9 1.0
C2A A:HEC202 4.3 7.1 1.0
C3D A:HEC202 4.3 7.8 1.0
C3A A:HEC202 4.3 6.8 1.0
C2D A:HEC202 4.3 7.9 1.0
C3B A:HEC202 4.3 6.7 1.0
C2C A:HEC202 4.3 9.3 1.0
C3C A:HEC202 4.3 9.1 1.0
CB A:MET100 4.3 15.7 1.0

Reference:

M.Stelter, A.M.Melo, M.M.Pereira, C.M.Gomes, G.O.Hreggvidsson, S.Hjorleifsdottir, L.M.Saraiva, M.Teixeira, M.Archer. A Novel Type of Monoheme Cytochrome C: Biochemical and Structural Characterization at 1.23 A Resolution of Rhodothermus Marinus Cytochrome C Biochemistry V. 47 11953 2008.
ISSN: ISSN 0006-2960
PubMed: 18855424
DOI: 10.1021/BI800999G
Page generated: Sun Aug 4 08:25:42 2024

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