Iron in PDB 3dp5: Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II

The structure of Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II, PDB code: 3dp5 was solved by P.Lukat, M.Hoffmann, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.08 / 1.86
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	53.475, 40.125, 42.085, 90.00, 90.00, 90.00
R / Rfree (%)	17 / 21

The binding sites of Iron atom in the Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II (pdb code 3dp5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II, PDB code: 3dp5:

Iron binding site 1 out of 1 in the Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Geobacter Sulfurreducens Omcf with N-Terminal Strep-Tag II within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe122 b:16.2 occ:1.00 FE A:HEC122 0.0 16.2 1.0 NC A:HEC122 2.0 14.2 1.0 NE2 A:HIS39 2.0 15.3 1.0 NB A:HEC122 2.1 14.8 1.0 ND A:HEC122 2.1 13.0 1.0 NA A:HEC122 2.1 13.8 1.0 SD A:MET79 2.4 13.0 1.0 CE1 A:HIS39 3.0 18.5 1.0 CD2 A:HIS39 3.0 14.6 1.0 C4C A:HEC122 3.0 14.8 1.0 C1C A:HEC122 3.1 13.7 1.0 C1B A:HEC122 3.1 13.3 1.0 C4B A:HEC122 3.1 14.6 1.0 C4D A:HEC122 3.1 14.3 1.0 C1D A:HEC122 3.1 13.7 1.0 C4A A:HEC122 3.1 13.0 1.0 C1A A:HEC122 3.1 16.2 1.0 CE A:MET79 3.3 13.5 1.0 CHD A:HEC122 3.4 15.3 1.0 CG A:MET79 3.4 12.4 1.0 CHC A:HEC122 3.4 13.3 1.0 CHA A:HEC122 3.4 14.3 1.0 CHB A:HEC122 3.4 15.0 1.0 CB A:MET79 4.0 14.1 1.0 ND1 A:HIS39 4.1 16.8 1.0 CG A:HIS39 4.2 14.7 1.0 C3C A:HEC122 4.3 12.3 1.0 C2C A:HEC122 4.3 13.8 1.0 C2B A:HEC122 4.3 13.7 1.0 C3B A:HEC122 4.3 12.6 1.0 C3D A:HEC122 4.3 12.3 1.0 C2D A:HEC122 4.3 11.8 1.0 C3A A:HEC122 4.3 14.3 1.0 C2A A:HEC122 4.3 15.9 1.0

P.Lukat, M.Hoffmann, O.Einsle. Crystal Packing of the C(6)-Type Cytochrome Omcf From Geobacter Sulfurreducens Is Mediated By An N-Terminal Strep-Tag II Acta Crystallogr.,Sect.D V. 64 919 2008.
ISSN: ISSN 0907-4449
PubMed: 18703839
DOI: 10.1107/S0907444908021306