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Iron in PDB 3dwj: Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase

Enzymatic activity of Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase

All present enzymatic activity of Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase:
1.14.13.39;

Protein crystallography data

The structure of Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase, PDB code: 3dwj was solved by J.Tejero, A.Biswas, Z.-Q.Wang, M.M.Haque, C.Hemann, J.L.Zweier, R.C.Page, S.Misra, D.J.Stuehr, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.77 / 2.75
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 214.597, 214.597, 111.933, 90.00, 90.00, 120.00
R / Rfree (%) 22.6 / 29.4

Iron Binding Sites:

The binding sites of Iron atom in the Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase (pdb code 3dwj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase, PDB code: 3dwj:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3dwj

Go back to Iron Binding Sites List in 3dwj
Iron binding site 1 out of 2 in the Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe901

b:51.5
occ:1.00
FE A:HEM901 0.0 51.5 1.0
NC A:HEM901 2.0 55.5 1.0
NA A:HEM901 2.1 57.6 1.0
NB A:HEM901 2.1 60.1 1.0
ND A:HEM901 2.2 52.5 1.0
SG A:CYS194 2.4 48.9 1.0
C4C A:HEM901 3.0 57.1 1.0
C1C A:HEM901 3.0 60.9 1.0
C4B A:HEM901 3.0 64.3 1.0
C1B A:HEM901 3.1 56.4 1.0
C4A A:HEM901 3.1 54.3 1.0
C1A A:HEM901 3.1 55.0 1.0
C1D A:HEM901 3.1 55.0 1.0
C4D A:HEM901 3.2 50.5 1.0
CHD A:HEM901 3.4 61.4 1.0
CB A:CYS194 3.4 60.9 1.0
CHC A:HEM901 3.4 64.2 1.0
CHB A:HEM901 3.4 49.3 1.0
CHA A:HEM901 3.5 56.5 1.0
O A:HOH1043 3.9 80.4 1.0
CA A:CYS194 4.2 57.0 1.0
C3C A:HEM901 4.2 64.1 1.0
C2C A:HEM901 4.2 60.9 1.0
C3B A:HEM901 4.2 69.0 1.0
C2B A:HEM901 4.3 63.2 1.0
C3A A:HEM901 4.3 50.9 1.0
C2A A:HEM901 4.3 48.8 1.0
C2D A:HEM901 4.4 43.1 1.0
C3D A:HEM901 4.4 39.9 1.0
NE2 A:HIS188 4.5 66.5 1.0
N A:GLY196 4.8 59.5 1.0
N A:NH4497 4.8 43.1 1.0
C A:CYS194 4.8 57.3 1.0
N A:ILE195 4.9 45.9 1.0
CD2 A:HIS188 4.9 61.6 1.0

Iron binding site 2 out of 2 in 3dwj

Go back to Iron Binding Sites List in 3dwj
Iron binding site 2 out of 2 in the Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Heme-Proximal W188H Mutant of Inducible Nitric Oxide Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe901

b:46.4
occ:1.00
FE B:HEM901 0.0 46.4 1.0
NC B:HEM901 2.0 65.3 1.0
NB B:HEM901 2.0 68.8 1.0
NA B:HEM901 2.0 43.6 1.0
ND B:HEM901 2.2 49.1 1.0
SG B:CYS194 2.7 48.0 1.0
C1C B:HEM901 3.0 66.9 1.0
C4B B:HEM901 3.0 65.5 1.0
C4C B:HEM901 3.0 58.6 1.0
C4A B:HEM901 3.1 42.4 1.0
C1A B:HEM901 3.1 45.8 1.0
C1B B:HEM901 3.1 61.6 1.0
C1D B:HEM901 3.2 46.0 1.0
C4D B:HEM901 3.2 47.8 1.0
CB B:CYS194 3.3 65.2 1.0
CHC B:HEM901 3.3 68.2 1.0
CHB B:HEM901 3.4 50.6 1.0
CHD B:HEM901 3.5 52.0 1.0
CHA B:HEM901 3.5 51.3 1.0
CA B:CYS194 4.1 57.1 1.0
C2C B:HEM901 4.2 56.2 1.0
C3C B:HEM901 4.2 53.6 1.0
C3B B:HEM901 4.2 61.2 1.0
C3A B:HEM901 4.3 42.2 1.0
C2B B:HEM901 4.3 57.8 1.0
C2A B:HEM901 4.3 43.2 1.0
NE2 B:HIS188 4.3 49.0 1.0
C2D B:HEM901 4.4 36.4 1.0
C3D B:HEM901 4.5 35.2 1.0
N B:NH41 4.5 57.1 1.0
CD2 B:HIS188 4.8 55.6 1.0
C B:CYS194 5.0 53.4 1.0

Reference:

J.Tejero, A.Biswas, Z.Q.Wang, R.C.Page, M.M.Haque, C.Hemann, J.L.Zweier, S.Misra, D.J.Stuehr. Stabilization and Characterization of A Heme-Oxy Reaction Intermediate in Inducible Nitric-Oxide Synthase J.Biol.Chem. V. 283 33498 2008.
ISSN: ISSN 0021-9258
PubMed: 18815130
DOI: 10.1074/JBC.M806122200
Page generated: Sun Dec 13 15:04:04 2020

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