Iron in PDB 3dxu: The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine

The structure of The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine, PDB code: 3dxu was solved by Z.Chen, G.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.95 / 2.20
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	71.543, 71.543, 150.194, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 22.1

The structure of The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Iron atom in the The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine (pdb code 3dxu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine, PDB code: 3dxu:

Iron binding site 1 out of 1 in the The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Crystal Structure of Core JMJD2D Complexed with Fe and N- Oxalylglycine within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe360 b:14.1 occ:1.00 OE1 A:GLU194 2.0 17.2 1.0 NE2 A:HIS280 2.1 13.8 1.0 NE2 A:HIS192 2.1 22.1 1.0 O A:HOH646 2.1 14.2 1.0 O2 A:OGA370 2.1 18.9 1.0 O2' A:OGA370 2.1 20.3 1.0 C1 A:OGA370 2.8 19.9 1.0 C2 A:OGA370 2.8 21.6 1.0 CE1 A:HIS192 2.9 25.0 1.0 CE1 A:HIS280 2.9 12.3 1.0 CD A:GLU194 3.1 15.2 1.0 CD2 A:HIS280 3.1 14.2 1.0 CD2 A:HIS192 3.2 18.1 1.0 OE2 A:GLU194 3.5 13.4 1.0 O1 A:OGA370 4.0 19.0 1.0 ND1 A:HIS192 4.0 22.4 1.0 N1 A:OGA370 4.1 19.9 1.0 ND1 A:HIS280 4.1 12.0 1.0 CG A:HIS192 4.2 18.9 1.0 CG A:HIS280 4.2 12.7 1.0 OG A:SER200 4.3 19.0 1.0 O1 A:GOL383 4.4 42.2 1.0 CG A:GLU194 4.4 12.1 1.0 C1 A:GOL383 4.7 41.8 1.0 CB A:SER200 4.9 13.7 1.0

Z.Chen, G.Zhang. The Crystal Structure of Core JMJD2D To Be Published.