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Iron in PDB 3e67: Murine Inos Dimer with Inhibitor 4-Map Bound

Enzymatic activity of Murine Inos Dimer with Inhibitor 4-Map Bound

All present enzymatic activity of Murine Inos Dimer with Inhibitor 4-Map Bound:
1.14.13.39;

Protein crystallography data

The structure of Murine Inos Dimer with Inhibitor 4-Map Bound, PDB code: 3e67 was solved by E.D.Garcin, A.S.Arvai, R.J.Rosenfeld, M.D.Kroeger, B.R.Crane, G.Andersson, G.Andrews, P.J.Hamley, P.R.Mallinder, D.J.Nicholls, S.A.St-Gallay, A.C.Tinker, N.P.Gensmantel, A.Mete, D.R.Cheshire, S.Connolly, D.J.Stueh, A.Aberg, A.V.Wallace, J.A.Tainer, E.D.Getzoff, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.99 / 2.60
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 214.093, 214.093, 115.828, 90.00, 90.00, 120.00
R / Rfree (%) 23.4 / 26.8

Iron Binding Sites:

The binding sites of Iron atom in the Murine Inos Dimer with Inhibitor 4-Map Bound (pdb code 3e67). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Murine Inos Dimer with Inhibitor 4-Map Bound, PDB code: 3e67:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3e67

Go back to Iron Binding Sites List in 3e67
Iron binding site 1 out of 2 in the Murine Inos Dimer with Inhibitor 4-Map Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Murine Inos Dimer with Inhibitor 4-Map Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe901

b:33.1
occ:1.00
FE A:HEM901 0.0 33.1 1.0
NC A:HEM901 2.0 32.0 1.0
ND A:HEM901 2.0 35.5 1.0
NB A:HEM901 2.0 32.5 1.0
NA A:HEM901 2.1 35.8 1.0
SG A:CYS194 2.3 41.9 1.0
C4C A:HEM901 3.0 33.1 1.0
C1D A:HEM901 3.0 34.9 1.0
C1C A:HEM901 3.0 32.1 1.0
C4D A:HEM901 3.1 35.7 1.0
C4B A:HEM901 3.1 31.8 1.0
C1A A:HEM901 3.1 37.5 1.0
C1B A:HEM901 3.1 31.7 1.0
C4A A:HEM901 3.1 34.6 1.0
CB A:CYS194 3.2 38.7 1.0
CHD A:HEM901 3.4 32.1 1.0
CHC A:HEM901 3.4 30.9 1.0
CHA A:HEM901 3.4 36.4 1.0
CHB A:HEM901 3.5 32.7 1.0
C3 A:BVF904 3.7 33.8 1.0
C4 A:BVF904 3.8 34.5 1.0
C8 A:BVF904 4.0 32.8 1.0
CA A:CYS194 4.0 39.3 1.0
C2 A:BVF904 4.1 33.1 1.0
C3D A:HEM901 4.2 34.8 1.0
C2D A:HEM901 4.3 34.2 1.0
C2C A:HEM901 4.3 32.7 1.0
C3C A:HEM901 4.3 33.3 1.0
C2B A:HEM901 4.3 31.4 1.0
C3B A:HEM901 4.3 30.3 1.0
C5 A:BVF904 4.3 36.9 1.0
C3A A:HEM901 4.3 35.7 1.0
C2A A:HEM901 4.3 37.4 1.0
NE1 A:TRP188 4.5 40.5 1.0
C1 A:BVF904 4.6 32.8 1.0
N6 A:BVF904 4.7 35.1 1.0
N A:ILE195 4.7 40.8 1.0
C A:CYS194 4.8 40.3 1.0
N A:GLY196 4.9 38.8 1.0
N7 A:BVF904 5.0 37.2 1.0

Iron binding site 2 out of 2 in 3e67

Go back to Iron Binding Sites List in 3e67
Iron binding site 2 out of 2 in the Murine Inos Dimer with Inhibitor 4-Map Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Murine Inos Dimer with Inhibitor 4-Map Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe901

b:38.1
occ:1.00
FE B:HEM901 0.0 38.1 1.0
NB B:HEM901 2.0 33.0 1.0
NA B:HEM901 2.0 33.1 1.0
ND B:HEM901 2.0 32.9 1.0
NC B:HEM901 2.1 31.6 1.0
SG B:CYS194 2.3 40.6 1.0
C1B B:HEM901 3.0 33.5 1.0
C1C B:HEM901 3.0 32.1 1.0
C4B B:HEM901 3.1 33.3 1.0
C4A B:HEM901 3.1 32.8 1.0
C1D B:HEM901 3.1 32.9 1.0
C4D B:HEM901 3.1 34.2 1.0
C1A B:HEM901 3.1 34.1 1.0
C4C B:HEM901 3.1 32.8 1.0
CHC B:HEM901 3.4 34.0 1.0
CB B:CYS194 3.4 39.2 1.0
CHB B:HEM901 3.4 31.9 1.0
CHA B:HEM901 3.4 34.5 1.0
CHD B:HEM901 3.5 32.0 1.0
C3 B:BVF905 3.6 32.5 1.0
C4 B:BVF905 3.8 33.0 1.0
C8 B:BVF905 3.8 29.3 1.0
C2 B:BVF905 4.1 32.1 1.0
CA B:CYS194 4.1 40.7 1.0
C2B B:HEM901 4.2 34.8 1.0
C3B B:HEM901 4.3 34.6 1.0
C3A B:HEM901 4.3 32.6 1.0
C3D B:HEM901 4.3 33.9 1.0
C2D B:HEM901 4.3 33.8 1.0
C2C B:HEM901 4.3 31.2 1.0
C2A B:HEM901 4.3 33.8 1.0
C3C B:HEM901 4.3 31.7 1.0
C5 B:BVF905 4.4 35.4 1.0
NE1 B:TRP188 4.4 36.1 1.0
C1 B:BVF905 4.6 34.8 1.0
N6 B:BVF905 4.8 36.0 1.0
N B:ILE195 4.8 40.0 1.0
C B:CYS194 4.9 40.9 1.0
N B:GLY196 5.0 38.6 1.0

Reference:

E.D.Garcin, A.S.Arvai, R.J.Rosenfeld, M.D.Kroeger, B.R.Crane, G.Andersson, G.Andrews, P.J.Hamley, P.R.Mallinder, D.J.Nicholls, S.A.St-Gallay, A.C.Tinker, N.P.Gensmantel, A.Mete, D.R.Cheshire, S.Connolly, D.J.Stuehr, A.Aberg, A.V.Wallace, J.A.Tainer, E.D.Getzoff. Anchored Plasticity Opens Doors For Selective Inhibitor Design in Nitric Oxide Synthase. Nat.Chem.Biol. V. 4 700 2008.
ISSN: ISSN 1552-4450
PubMed: 18849972
DOI: 10.1038/NCHEMBIO.115
Page generated: Sun Aug 4 09:24:02 2024

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