Iron in PDB 3emm: X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme

The structure of X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme, PDB code: 3emm was solved by C.M.Bianchetti, C.A.Bingman, G.E.Wesenberg, G.N.Phillips Jr., Center Foreukaryotic Structural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.84 / 1.36
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	59.749, 79.732, 36.971, 90.00, 90.00, 90.00
R / Rfree (%)	17 / 19.8

The binding sites of Iron atom in the X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme (pdb code 3emm). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme, PDB code: 3emm:

Iron binding site 1 out of 1 in the X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of Protein From Arabidopsis Thaliana AT1G79260 with Bound Heme within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe200 b:21.4 occ:1.00 FE A:HEM200 0.0 21.4 1.0 NA A:HEM200 2.0 21.4 1.0 NB A:HEM200 2.0 19.1 1.0 ND A:HEM200 2.1 22.4 1.0 NC A:HEM200 2.1 21.1 1.0 NE2 A:HIS158 2.2 11.3 1.0 O A:HOH3432 2.5 33.7 1.0 C1B A:HEM200 3.0 17.6 1.0 C4A A:HEM200 3.0 20.8 1.0 C4D A:HEM200 3.1 23.6 1.0 C1A A:HEM200 3.1 22.6 1.0 C4B A:HEM200 3.1 17.0 1.0 C4C A:HEM200 3.1 20.5 1.0 C1D A:HEM200 3.1 23.2 1.0 C1C A:HEM200 3.1 18.7 1.0 CE1 A:HIS158 3.2 10.0 1.0 CD2 A:HIS158 3.2 10.1 1.0 CHB A:HEM200 3.4 19.9 1.0 CHA A:HEM200 3.4 23.3 1.0 CHD A:HEM200 3.4 22.0 1.0 CHC A:HEM200 3.5 18.1 1.0 C2B A:HEM200 4.2 17.0 1.0 C3B A:HEM200 4.3 16.8 1.0 C3A A:HEM200 4.3 22.3 1.0 C2A A:HEM200 4.3 23.4 1.0 ND1 A:HIS158 4.3 10.5 1.0 C3C A:HEM200 4.3 19.1 1.0 C3D A:HEM200 4.3 26.0 1.0 C2C A:HEM200 4.3 18.5 1.0 C2D A:HEM200 4.3 25.0 1.0 CG A:HIS158 4.3 9.7 1.0 O A:HOH3560 4.5 49.0 1.0 O A:HOH3558 4.5 38.5 1.0 O A:HOH3367 4.9 24.5 1.0

C.M.Bianchetti, G.C.Blouin, E.Bitto, J.S.Olson, G.N.Phillips. The Structure and No Binding Properties of the Nitrophorin-Like Heme-Binding Protein From Arabidopsis Thaliana Gene Locus AT1G79260.1. Proteins V. 78 917 2010.
ISSN: ISSN 0887-3585
PubMed: 19938152
DOI: 10.1002/PROT.22617