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Iron in PDB 3h1s: Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4

Enzymatic activity of Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4

All present enzymatic activity of Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4, PDB code: 3h1s was solved by B.Nocek, M.Zhou, L.Papazisi, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.90
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 136.787, 136.787, 59.765, 90.00, 90.00, 120.00
R / Rfree (%) 16.5 / 20.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4 (pdb code 3h1s). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4, PDB code: 3h1s:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3h1s

Go back to Iron Binding Sites List in 3h1s
Iron binding site 1 out of 2 in the Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1001

b:39.1
occ:1.00
OD2 A:ASP156 1.9 19.9 1.0
NE2 A:HIS74 2.1 25.0 1.0
NE2 A:HIS160 2.1 21.2 1.0
NE2 A:HIS27 2.2 19.2 1.0
O A:HOH236 2.2 24.0 1.0
CD2 A:HIS74 3.0 24.3 1.0
CD2 A:HIS160 3.0 21.9 1.0
CG A:ASP156 3.1 20.9 1.0
CE1 A:HIS160 3.1 20.9 1.0
CE1 A:HIS27 3.1 23.3 1.0
CE1 A:HIS74 3.1 24.3 1.0
CD2 A:HIS27 3.1 20.1 1.0
OD1 A:ASP156 3.6 20.2 1.0
CG A:HIS74 4.1 26.5 1.0
ND1 A:HIS74 4.2 23.8 1.0
CG A:HIS160 4.2 19.7 1.0
ND1 A:HIS160 4.2 18.7 1.0
ND1 A:HIS27 4.2 21.3 1.0
CG A:HIS27 4.3 21.1 1.0
CB A:ASP156 4.4 20.5 1.0
CH2 A:TRP122 4.4 24.3 1.0
CZ2 A:TRP122 4.4 24.4 1.0
CB A:TRP158 4.5 18.7 1.0
CG A:TRP158 4.6 19.2 1.0
CD1 A:TRP158 4.9 21.2 1.0
NE2 A:GLN70 4.9 23.2 1.0

Iron binding site 2 out of 2 in 3h1s

Go back to Iron Binding Sites List in 3h1s
Iron binding site 2 out of 2 in the Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe1001

b:30.8
occ:1.00
OD2 B:ASP156 2.0 14.1 1.0
NE2 B:HIS74 2.1 15.1 1.0
NE2 B:HIS160 2.2 11.5 1.0
O B:HOH284 2.2 15.9 1.0
NE2 B:HIS27 2.2 14.2 1.0
CE1 B:HIS74 3.1 13.5 1.0
CD2 B:HIS160 3.1 14.3 1.0
CG B:ASP156 3.1 15.8 1.0
CD2 B:HIS74 3.1 15.1 1.0
CE1 B:HIS27 3.2 17.6 1.0
CD2 B:HIS27 3.2 15.4 1.0
CE1 B:HIS160 3.2 14.1 1.0
OD1 B:ASP156 3.5 15.2 1.0
ND1 B:HIS74 4.2 15.2 1.0
CG B:HIS160 4.2 15.8 1.0
CG B:HIS74 4.2 15.4 1.0
ND1 B:HIS27 4.3 15.2 1.0
ND1 B:HIS160 4.3 12.4 1.0
CG B:HIS27 4.3 19.0 1.0
CH2 B:TRP122 4.3 14.2 1.0
CB B:ASP156 4.4 14.3 1.0
CZ2 B:TRP122 4.4 14.1 1.0
CB B:TRP158 4.5 14.8 1.0
CG B:TRP158 4.7 11.4 1.0
CB B:ALA161 4.8 13.2 1.0
CD1 B:TRP158 4.9 9.5 1.0
NE2 B:GLN70 4.9 15.6 1.0

Reference:

B.Nocek, M.Zhou, L.Papazisi, W.F.Anderson, A.Joachimiak. Crystal Structure of Superoxide Dismutase From Francisella Tularensis Subsp. Tularensis Schu S4 To Be Published.
Page generated: Sun Aug 4 11:04:13 2024

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