Iron in PDB 3h31: Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution

The structure of Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution, PDB code: 3h31 was solved by M.Stelter, A.M.P.Melo, L.Saraiva, M.Teixeira, M.Archer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	27.267, 43.343, 46.787, 90.00, 90.00, 90.00
R / Rfree (%)	10.4 / 14.4

The binding sites of Iron atom in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution (pdb code 3h31). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution, PDB code: 3h31:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe75 b:5.2 occ:1.00 FE1 A:SF475 0.0 5.2 1.0 S3 A:SF475 2.2 5.4 1.0 SG A:CYS53 2.3 5.8 1.0 S4 A:SF475 2.3 5.3 1.0 S2 A:SF475 2.3 5.6 1.0 FE4 A:SF475 2.7 5.3 1.0 FE3 A:SF475 2.7 5.1 1.0 FE2 A:SF475 2.7 5.0 1.0 CB A:CYS53 3.2 5.6 1.0 S1 A:SF475 3.9 5.3 1.0 CA A:CYS53 4.4 5.5 1.0 CB A:LEU40 4.5 6.5 1.0 SG A:CYS66 4.5 5.4 1.0 CG1 A:ILE56 4.6 5.6 0.6 SG A:CYS38 4.7 5.8 1.0 SG A:CYS35 4.7 5.1 1.0 CG1 A:ILE56 4.8 8.2 0.4 C A:LEU40 4.8 5.8 1.0 O A:LEU40 4.9 6.0 1.0 CB A:LEU55 4.9 7.6 1.0 CD1 A:ILE56 4.9 6.0 0.6 CB A:ILE56 4.9 7.4 0.4 CG2 A:ILE60 5.0 5.9 1.0

Iron binding site 2 out of 4 in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe75 b:5.0 occ:1.00 FE2 A:SF475 0.0 5.0 1.0 S4 A:SF475 2.2 5.3 1.0 SG A:CYS35 2.3 5.1 1.0 S3 A:SF475 2.3 5.4 1.0 S1 A:SF475 2.3 5.3 1.0 FE3 A:SF475 2.7 5.1 1.0 FE1 A:SF475 2.7 5.2 1.0 FE4 A:SF475 2.8 5.3 1.0 CB A:CYS35 3.2 5.0 1.0 CA A:CYS35 3.6 5.0 1.0 S2 A:SF475 3.9 5.6 1.0 CG2 A:ILE60 4.3 5.9 1.0 N A:CYS35 4.3 5.0 1.0 N A:CYS66 4.4 4.9 1.0 CA A:TYR65 4.5 5.0 1.0 C A:TYR65 4.5 4.9 1.0 N A:TYR65 4.7 4.5 1.0 CB A:CYS38 4.8 5.7 1.0 SG A:CYS38 4.8 5.8 1.0 SG A:CYS66 4.8 5.4 1.0 SG A:CYS53 4.9 5.8 1.0 C A:CYS35 4.9 5.1 1.0

Iron binding site 3 out of 4 in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe75 b:5.1 occ:1.00 FE3 A:SF475 0.0 5.1 1.0 SG A:CYS66 2.3 5.4 1.0 S1 A:SF475 2.3 5.3 1.0 S2 A:SF475 2.3 5.6 1.0 S4 A:SF475 2.3 5.3 1.0 FE1 A:SF475 2.7 5.2 1.0 FE4 A:SF475 2.7 5.3 1.0 FE2 A:SF475 2.7 5.0 1.0 CB A:CYS66 3.2 5.1 1.0 N A:CYS66 3.6 4.9 1.0 CA A:CYS66 3.8 5.0 1.0 S3 A:SF475 3.9 5.4 1.0 O A:CYS66 4.1 5.3 1.0 C A:CYS66 4.2 4.5 1.0 N A:TRP69 4.3 5.8 1.0 C A:TYR65 4.5 4.9 1.0 CD1 A:ILE56 4.5 9.9 0.4 CA A:TRP69 4.6 5.8 1.0 SG A:CYS53 4.6 5.8 1.0 C A:SER68 4.7 6.7 1.0 SG A:CYS35 4.8 5.1 1.0 SG A:CYS38 4.8 5.8 1.0 N A:SER68 4.9 5.9 1.0 CG1 A:ILE56 5.0 8.2 0.4 CB A:SER68 5.0 8.2 0.7

Iron binding site 4 out of 4 in the Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of Rhodothermus Marinus Hipip at 1.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe75 b:5.3 occ:1.00 FE4 A:SF475 0.0 5.3 1.0 S2 A:SF475 2.2 5.6 1.0 SG A:CYS38 2.3 5.8 1.0 S1 A:SF475 2.3 5.3 1.0 S3 A:SF475 2.3 5.4 1.0 FE1 A:SF475 2.7 5.2 1.0 FE3 A:SF475 2.7 5.1 1.0 FE2 A:SF475 2.8 5.0 1.0 CB A:CYS38 3.1 5.7 1.0 S4 A:SF475 3.9 5.3 1.0 CA A:TRP69 4.1 5.8 1.0 CB A:LEU40 4.3 6.5 1.0 SG A:CYS53 4.6 5.8 1.0 CA A:CYS38 4.6 5.7 1.0 N A:TRP69 4.6 5.8 1.0 CD1 A:TRP69 4.7 5.5 1.0 N A:VAL70 4.7 7.2 1.0 N A:LEU40 4.7 5.7 1.0 CA A:CYS35 4.7 5.0 1.0 SG A:CYS66 4.8 5.4 1.0 SG A:CYS35 4.8 5.1 1.0 CB A:TRP69 4.8 5.5 1.0 N A:TYR41 4.8 5.5 1.0 CA A:LEU40 4.9 6.0 1.0 C A:LEU40 4.9 5.8 1.0

M.Stelter, A.M.P.Melo, G.O.Hreggvidsson, S.Hjorleifsdottir, L.M.Saraiva, M.Teixeira, M.Archer. Structure at 1.0 A Resolution of A High-Potential Iron-Sulfur Protein Involved in the Aerobic Respiratory Chain of Rhodothermus Marinus J.Biol.Inorg.Chem. V. 15 303 2010.
ISSN: ISSN 0949-8257
PubMed: 20225399
DOI: 10.1007/S00775-009-0603-8