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Iron in PDB 3h7y: Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form

Protein crystallography data

The structure of Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form, PDB code: 3h7y was solved by M.Rajavel, B.Gopal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.33 / 2.22
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 68.661, 68.661, 211.525, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 26

Other elements in 3h7y:

The structure of Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form also contains other interesting chemical elements:

Cobalt (Co) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form (pdb code 3h7y). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form, PDB code: 3h7y:

Iron binding site 1 out of 1 in 3h7y

Go back to Iron Binding Sites List in 3h7y
Iron binding site 1 out of 1 in the Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Bacb, An Enzyme Involved in Bacilysin Synthesis, in Tetragonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe247

b:21.2
occ:1.00
O B:HOH296 2.2 5.2 1.0
O B:GLU119 2.3 7.0 1.0
OE2 B:GLU119 2.3 3.4 1.0
O B:PHE122 2.4 5.2 1.0
O B:HOH252 2.6 2.0 1.0
CD B:GLU119 3.3 5.2 1.0
C B:GLU119 3.5 7.2 1.0
C B:PHE122 3.6 5.7 1.0
CG B:GLU119 4.0 6.1 1.0
OE1 B:GLU119 4.2 5.0 1.0
O B:HOH303 4.3 2.2 1.0
CA B:PHE122 4.3 5.7 1.0
N B:ASP120 4.4 6.8 1.0
N B:PHE122 4.4 5.9 1.0
CA B:ASP120 4.4 6.7 1.0
CA B:GLU119 4.4 7.3 1.0
CB B:PHE122 4.5 5.5 1.0
N B:LEU123 4.6 6.0 1.0
OD2 B:ASP124 4.6 5.3 1.0
OD1 B:ASP120 4.7 8.4 1.0
CA B:LEU123 4.7 6.6 1.0
NH1 B:ARG74 4.8 7.7 1.0
CB B:GLU119 4.8 7.1 1.0
C B:ASP120 5.0 6.4 1.0

Reference:

M.Rajavel, A.Mitra, B.Gopal. Role of Bacillus Subtilis Bacb in the Synthesis of Bacilysin J.Biol.Chem. V. 284 31882 2009.
ISSN: ISSN 0021-9258
PubMed: 19776011
DOI: 10.1074/JBC.M109.014522
Page generated: Sun Aug 4 11:23:31 2024

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