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Iron in PDB 3hen: Ferric Horse Heart Myoglobin; H64V/V67R Mutant

Protein crystallography data

The structure of Ferric Horse Heart Myoglobin; H64V/V67R Mutant, PDB code: 3hen was solved by J.Yi, L.M.Thomas, G.B.Richter-Addo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.09 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 30.323, 119.002, 57.775, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 23.3

Iron Binding Sites:

The binding sites of Iron atom in the Ferric Horse Heart Myoglobin; H64V/V67R Mutant (pdb code 3hen). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Ferric Horse Heart Myoglobin; H64V/V67R Mutant, PDB code: 3hen:

Iron binding site 1 out of 1 in 3hen

Go back to Iron Binding Sites List in 3hen
Iron binding site 1 out of 1 in the Ferric Horse Heart Myoglobin; H64V/V67R Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ferric Horse Heart Myoglobin; H64V/V67R Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:21.3
occ:1.00
FE A:HEM154 0.0 21.3 1.0
NA A:HEM154 2.0 20.9 1.0
NC A:HEM154 2.1 19.1 1.0
ND A:HEM154 2.1 19.7 1.0
NB A:HEM154 2.2 19.3 1.0
NE2 A:HIS93 2.2 20.5 1.0
C1A A:HEM154 3.0 23.3 1.0
C4A A:HEM154 3.1 23.0 1.0
C4D A:HEM154 3.1 21.3 1.0
C1C A:HEM154 3.1 17.3 1.0
CE1 A:HIS93 3.1 23.4 1.0
C1D A:HEM154 3.1 20.4 1.0
C4C A:HEM154 3.1 20.2 1.0
C4B A:HEM154 3.2 18.2 1.0
C1B A:HEM154 3.2 19.5 1.0
CD2 A:HIS93 3.2 22.2 1.0
CHA A:HEM154 3.4 22.8 1.0
CHC A:HEM154 3.4 20.0 1.0
CHB A:HEM154 3.5 20.8 1.0
CHD A:HEM154 3.5 15.5 1.0
CG2 A:VAL68 4.2 19.9 1.0
C2A A:HEM154 4.2 26.5 1.0
ND1 A:HIS93 4.2 20.3 1.0
C3A A:HEM154 4.3 21.9 1.0
C2C A:HEM154 4.3 20.6 1.0
C3D A:HEM154 4.3 23.2 1.0
CG A:HIS93 4.3 20.8 1.0
C3C A:HEM154 4.3 19.1 1.0
C2D A:HEM154 4.4 20.9 1.0
C3B A:HEM154 4.4 14.5 1.0
C2B A:HEM154 4.5 17.4 1.0

Reference:

J.Yi, J.Heinecke, H.Tan, P.C.Ford, G.B.Richter-Addo. The Distal Pocket Histidine Residue in Horse Heart Myoglobin Directs the O-Binding Mode of Nitrite to the Heme Iron. J.Am.Chem.Soc. V. 131 18119 2009.
ISSN: ISSN 0002-7863
PubMed: 19924902
DOI: 10.1021/JA904726Q
Page generated: Sun Aug 4 11:26:13 2024

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