Atomistry » Iron » PDB 3hnj-3i8r » 3hqu
Atomistry »
  Iron »
    PDB 3hnj-3i8r »
      3hqu »

Iron in PDB 3hqu: PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex

Protein crystallography data

The structure of PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex, PDB code: 3hqu was solved by R.Chowdhury, M.A.Mcdonough, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.55 / 2.30
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 110.819, 110.819, 39.615, 90.00, 90.00, 120.00
R / Rfree (%) 18.8 / 22.2

Other elements in 3hqu:

The structure of PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex (pdb code 3hqu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex, PDB code: 3hqu:

Iron binding site 1 out of 1 in 3hqu

Go back to Iron Binding Sites List in 3hqu
Iron binding site 1 out of 1 in the PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of PHD2:Fe:UN9:Partial HIF1-Alpha Substrate Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe450

b:17.8
occ:1.00
O13 A:UN9500 2.1 17.3 1.0
OD2 A:ASP315 2.2 19.9 1.0
NE2 A:HIS374 2.2 14.1 1.0
N8 A:UN9500 2.2 12.9 1.0
NE2 A:HIS313 2.2 21.8 1.0
O A:HOH1012 2.2 15.8 1.0
C12 A:UN9500 2.8 13.6 1.0
C9 A:UN9500 2.9 12.3 1.0
CE1 A:HIS313 3.0 18.5 1.0
CG A:ASP315 3.1 15.8 1.0
CE1 A:HIS374 3.1 17.4 1.0
CD2 A:HIS374 3.1 14.8 1.0
C7 A:UN9500 3.2 11.9 1.0
CD2 A:HIS313 3.3 22.9 1.0
OD1 A:ASP315 3.4 21.0 1.0
CL1 A:UN9500 3.6 1.1 1.0
N14 A:UN9500 4.1 13.9 1.0
ND1 A:HIS313 4.2 20.1 1.0
O A:HOH1024 4.2 12.7 1.0
ND1 A:HIS374 4.2 15.0 1.0
C10 A:UN9500 4.3 15.8 1.0
CG A:HIS374 4.3 18.3 1.0
CG A:HIS313 4.3 20.6 1.0
C2 A:UN9500 4.5 14.8 1.0
CB A:ASP315 4.5 17.9 1.0
C15 A:UN9500 4.8 10.7 1.0
CA A:ASP315 4.8 17.1 1.0
CZ A:PHE366 4.8 14.8 1.0
C3 A:UN9500 4.9 15.1 1.0
N A:ASP315 5.0 17.6 1.0

Reference:

R.Chowdhury, M.A.Mcdonough, J.Mecinovic, C.Loenarz, E.Flashman, K.S.Hewitson, C.Domene, C.J.Schofield. Structural Basis For Binding of Hypoxia-Inducible Factor to the Oxygen-Sensing Prolyl Hydroxylases Structure V. 17 981 2009.
ISSN: ISSN 0969-2126
PubMed: 19604478
DOI: 10.1016/J.STR.2009.06.002
Page generated: Sun Dec 13 15:08:01 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy