Iron in PDB 3l0p: Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas

All present enzymatic activity of Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas:
2.7.4.3;

The structure of Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas, PDB code: 3l0p was solved by A.Mukhopadhyay, J.Trincao, M.J.Romao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.25 / 3.00
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	38.800, 119.160, 146.710, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 25.2

The binding sites of Iron atom in the Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas (pdb code 3l0p). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas, PDB code: 3l0p:

Iron binding site 1 out of 1 in the Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structures of Iron Containing Adenylate Kinase From Desulfovibrio Gigas within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe224 b:46.0 occ:0.80 ND1 A:HIS135 2.1 35.3 1.0 SG A:CYS129 2.1 41.9 1.0 SG A:CYS151 2.2 32.6 1.0 SG A:CYS154 2.8 45.5 1.0 CB A:CYS129 3.0 40.3 1.0 CG A:HIS135 3.1 35.2 1.0 CE1 A:HIS135 3.1 35.7 1.0 CB A:CYS151 3.1 37.9 1.0 CB A:HIS135 3.4 36.3 1.0 N A:CYS154 3.8 36.8 1.0 CB A:CYS154 3.9 40.0 1.0 O A:ASN132 4.1 42.2 1.0 NE2 A:HIS135 4.2 35.3 1.0 CD2 A:HIS135 4.2 35.0 1.0 CB A:VAL153 4.2 35.2 1.0 CA A:CYS154 4.4 38.9 1.0 CA A:CYS129 4.5 41.4 1.0 N A:ASN132 4.6 47.3 1.0 CA A:CYS151 4.6 38.2 1.0 CB A:ASN131 4.6 50.5 1.0 N A:GLY156 4.6 46.1 1.0 C A:VAL153 4.8 36.0 1.0 ND2 A:ASN131 4.8 53.6 1.0 CG1 A:VAL153 4.8 34.6 1.0 CA A:VAL153 4.8 34.6 1.0 CB A:ASN132 4.8 46.7 1.0 N A:GLY155 4.8 40.0 1.0 N A:VAL153 4.9 34.7 1.0 CA A:HIS135 4.9 35.6 1.0 C A:CYS154 4.9 40.1 1.0 OD1 A:ASN137 5.0 44.3 1.0

A.Mukhopadhyay, A.V.Kladova, S.A.Bursakov, O.Y.Gavel, J.J.Calvete, V.L.Shnyrov, I.Moura, J.J.G.Moura, M.J.Romao, J.Trincao. Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase From Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase From Gram-Negative Bacteria J.Biol.Inorg.Chem. V. 16 51 2011.
ISSN: ISSN 0949-8257
PubMed: 20821240
DOI: 10.1007/S00775-010-0700-8