Iron in PDB 3l75: Cytochrome BC1 Complex From Chicken with Fenamidone Bound
Enzymatic activity of Cytochrome BC1 Complex From Chicken with Fenamidone Bound
All present enzymatic activity of Cytochrome BC1 Complex From Chicken with Fenamidone Bound:
1.10.2.2;
Protein crystallography data
The structure of Cytochrome BC1 Complex From Chicken with Fenamidone Bound, PDB code: 3l75
was solved by
L.Huang,
E.A.Berry,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
58.78 /
2.79
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
172.285,
182.141,
241.198,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
24.8 /
27.5
|
Iron Binding Sites:
The binding sites of Iron atom in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
(pdb code 3l75). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Cytochrome BC1 Complex From Chicken with Fenamidone Bound, PDB code: 3l75:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 1 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:29.7
occ:1.00
|
FE
|
C:HEM501
|
0.0
|
29.7
|
1.0
|
|
NB
|
C:HEM501
|
1.9
|
30.0
|
1.0
|
|
NC
|
C:HEM501
|
1.9
|
31.0
|
1.0
|
|
NA
|
C:HEM501
|
2.0
|
30.4
|
1.0
|
|
ND
|
C:HEM501
|
2.0
|
30.4
|
1.0
|
|
NE2
|
C:HIS183
|
2.0
|
30.4
|
1.0
|
|
NE2
|
C:HIS84
|
2.0
|
31.9
|
1.0
|
|
CE1
|
C:HIS183
|
2.8
|
34.0
|
1.0
|
|
CE1
|
C:HIS84
|
2.9
|
33.1
|
1.0
|
|
C4B
|
C:HEM501
|
2.9
|
31.4
|
1.0
|
|
C1C
|
C:HEM501
|
3.0
|
32.0
|
1.0
|
|
C4C
|
C:HEM501
|
3.0
|
31.8
|
1.0
|
|
C4A
|
C:HEM501
|
3.0
|
29.6
|
1.0
|
|
C1B
|
C:HEM501
|
3.0
|
30.1
|
1.0
|
|
C1A
|
C:HEM501
|
3.0
|
30.7
|
1.0
|
|
C1D
|
C:HEM501
|
3.0
|
31.5
|
1.0
|
|
C4D
|
C:HEM501
|
3.0
|
30.9
|
1.0
|
|
CD2
|
C:HIS84
|
3.1
|
32.2
|
1.0
|
|
CD2
|
C:HIS183
|
3.1
|
30.6
|
1.0
|
|
CHC
|
C:HEM501
|
3.3
|
32.9
|
1.0
|
|
CHB
|
C:HEM501
|
3.4
|
30.3
|
1.0
|
|
CHD
|
C:HEM501
|
3.4
|
32.1
|
1.0
|
|
CHA
|
C:HEM501
|
3.4
|
30.0
|
1.0
|
|
ND1
|
C:HIS183
|
4.0
|
32.6
|
1.0
|
|
ND1
|
C:HIS84
|
4.1
|
32.4
|
1.0
|
|
CG
|
C:HIS84
|
4.2
|
32.6
|
1.0
|
|
CG
|
C:HIS183
|
4.2
|
30.0
|
1.0
|
|
C3B
|
C:HEM501
|
4.2
|
29.7
|
1.0
|
|
C2C
|
C:HEM501
|
4.2
|
32.3
|
1.0
|
|
C2A
|
C:HEM501
|
4.2
|
30.3
|
1.0
|
|
C3C
|
C:HEM501
|
4.2
|
33.5
|
1.0
|
|
C3A
|
C:HEM501
|
4.3
|
28.5
|
1.0
|
|
C2B
|
C:HEM501
|
4.3
|
28.9
|
1.0
|
|
C2D
|
C:HEM501
|
4.3
|
31.1
|
1.0
|
|
C3D
|
C:HEM501
|
4.3
|
32.0
|
1.0
|
|
NE2
|
C:GLN45
|
4.9
|
37.3
|
1.0
|
|
CA
|
C:GLY49
|
5.0
|
27.8
|
1.0
|
|
CA
|
C:GLY131
|
5.0
|
30.8
|
1.0
|
|
Iron binding site 2 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 2 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:25.8
occ:1.00
|
FE
|
C:HEM502
|
0.0
|
25.8
|
1.0
|
|
NB
|
C:HEM502
|
1.9
|
25.0
|
1.0
|
|
NA
|
C:HEM502
|
1.9
|
26.5
|
1.0
|
|
ND
|
C:HEM502
|
1.9
|
25.2
|
1.0
|
|
NC
|
C:HEM502
|
2.0
|
26.1
|
1.0
|
|
NE2
|
C:HIS197
|
2.0
|
26.6
|
1.0
|
|
NE2
|
C:HIS98
|
2.0
|
27.3
|
1.0
|
|
C4B
|
C:HEM502
|
2.9
|
27.6
|
1.0
|
|
CD2
|
C:HIS197
|
2.9
|
28.2
|
1.0
|
|
C1B
|
C:HEM502
|
3.0
|
26.1
|
1.0
|
|
C1D
|
C:HEM502
|
3.0
|
26.4
|
1.0
|
|
C1A
|
C:HEM502
|
3.0
|
25.8
|
1.0
|
|
C4A
|
C:HEM502
|
3.0
|
28.3
|
1.0
|
|
CE1
|
C:HIS98
|
3.0
|
25.6
|
1.0
|
|
C4D
|
C:HEM502
|
3.0
|
27.0
|
1.0
|
|
CD2
|
C:HIS98
|
3.0
|
26.2
|
1.0
|
|
C4C
|
C:HEM502
|
3.0
|
23.8
|
1.0
|
|
C1C
|
C:HEM502
|
3.0
|
26.1
|
1.0
|
|
CE1
|
C:HIS197
|
3.1
|
27.4
|
1.0
|
|
CHC
|
C:HEM502
|
3.4
|
26.7
|
1.0
|
|
CHA
|
C:HEM502
|
3.4
|
26.9
|
1.0
|
|
CHD
|
C:HEM502
|
3.4
|
24.9
|
1.0
|
|
CHB
|
C:HEM502
|
3.4
|
25.5
|
1.0
|
|
CG
|
C:HIS197
|
4.1
|
29.6
|
1.0
|
|
ND1
|
C:HIS98
|
4.1
|
24.5
|
1.0
|
|
ND1
|
C:HIS197
|
4.1
|
28.0
|
1.0
|
|
CG
|
C:HIS98
|
4.2
|
25.6
|
1.0
|
|
C3B
|
C:HEM502
|
4.2
|
27.0
|
1.0
|
|
C2B
|
C:HEM502
|
4.2
|
25.8
|
1.0
|
|
C2A
|
C:HEM502
|
4.2
|
27.6
|
1.0
|
|
C3A
|
C:HEM502
|
4.2
|
27.4
|
1.0
|
|
C2C
|
C:HEM502
|
4.3
|
25.4
|
1.0
|
|
C2D
|
C:HEM502
|
4.3
|
26.6
|
1.0
|
|
C3C
|
C:HEM502
|
4.3
|
25.1
|
1.0
|
|
C3D
|
C:HEM502
|
4.3
|
26.9
|
1.0
|
|
Iron binding site 3 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 3 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe501
b:32.0
occ:1.00
|
FE
|
D:HEC501
|
0.0
|
32.0
|
1.0
|
|
ND
|
D:HEC501
|
1.9
|
26.6
|
1.0
|
|
NA
|
D:HEC501
|
1.9
|
27.2
|
1.0
|
|
NC
|
D:HEC501
|
2.0
|
30.2
|
1.0
|
|
NB
|
D:HEC501
|
2.0
|
29.9
|
1.0
|
|
NE2
|
D:HIS41
|
2.0
|
31.6
|
1.0
|
|
SD
|
D:MET160
|
2.2
|
35.3
|
1.0
|
|
C1D
|
D:HEC501
|
2.9
|
29.0
|
1.0
|
|
CE1
|
D:HIS41
|
3.0
|
34.5
|
1.0
|
|
C4D
|
D:HEC501
|
3.0
|
29.0
|
1.0
|
|
C4A
|
D:HEC501
|
3.0
|
27.7
|
1.0
|
|
C1B
|
D:HEC501
|
3.0
|
31.2
|
1.0
|
|
C4C
|
D:HEC501
|
3.0
|
30.4
|
1.0
|
|
C1A
|
D:HEC501
|
3.0
|
28.5
|
1.0
|
|
CD2
|
D:HIS41
|
3.0
|
33.9
|
1.0
|
|
C1C
|
D:HEC501
|
3.0
|
31.8
|
1.0
|
|
C4B
|
D:HEC501
|
3.0
|
31.9
|
1.0
|
|
CHD
|
D:HEC501
|
3.3
|
30.4
|
1.0
|
|
CHA
|
D:HEC501
|
3.4
|
27.7
|
1.0
|
|
CHB
|
D:HEC501
|
3.4
|
29.6
|
1.0
|
|
CE
|
D:MET160
|
3.4
|
25.8
|
1.0
|
|
CHC
|
D:HEC501
|
3.4
|
31.6
|
1.0
|
|
CG
|
D:MET160
|
3.6
|
30.1
|
1.0
|
|
ND1
|
D:HIS41
|
4.1
|
36.0
|
1.0
|
|
CG
|
D:HIS41
|
4.1
|
35.3
|
1.0
|
|
C3A
|
D:HEC501
|
4.2
|
27.1
|
1.0
|
|
C2B
|
D:HEC501
|
4.2
|
32.9
|
1.0
|
|
C2D
|
D:HEC501
|
4.2
|
28.8
|
1.0
|
|
C2A
|
D:HEC501
|
4.2
|
27.6
|
1.0
|
|
CB
|
D:MET160
|
4.3
|
32.8
|
1.0
|
|
C3B
|
D:HEC501
|
4.3
|
32.5
|
1.0
|
|
C3C
|
D:HEC501
|
4.3
|
32.2
|
1.0
|
|
C2C
|
D:HEC501
|
4.3
|
31.9
|
1.0
|
|
C3D
|
D:HEC501
|
4.3
|
29.9
|
1.0
|
|
Iron binding site 4 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 4 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:86.1
occ:0.91
|
FE1
|
E:FES501
|
0.0
|
86.1
|
0.9
|
|
S2
|
E:FES501
|
2.2
|
85.4
|
0.9
|
|
S1
|
E:FES501
|
2.2
|
84.5
|
0.9
|
|
SG
|
E:CYS139
|
2.2
|
82.0
|
0.9
|
|
SG
|
E:CYS158
|
2.3
|
84.7
|
0.9
|
|
FE2
|
E:FES501
|
2.7
|
83.4
|
0.9
|
|
CB
|
E:CYS139
|
3.0
|
81.1
|
0.9
|
|
CB
|
E:CYS158
|
3.1
|
87.4
|
0.9
|
|
CB
|
E:HIS141
|
3.9
|
76.7
|
0.9
|
|
OG
|
E:SER163
|
4.1
|
89.6
|
0.9
|
|
CB
|
E:SER163
|
4.3
|
93.3
|
0.9
|
|
CB
|
E:CYS144
|
4.3
|
75.2
|
0.9
|
|
CB
|
E:CYS160
|
4.3
|
84.7
|
0.9
|
|
ND1
|
E:HIS141
|
4.4
|
79.7
|
0.9
|
|
CA
|
E:CYS139
|
4.4
|
79.9
|
0.9
|
|
CA
|
E:CYS158
|
4.5
|
87.8
|
0.9
|
|
N
|
E:CYS144
|
4.6
|
73.6
|
0.9
|
|
ND1
|
E:HIS161
|
4.6
|
86.2
|
0.9
|
|
N
|
E:HIS161
|
4.6
|
89.8
|
0.9
|
|
CG
|
E:HIS141
|
4.6
|
78.0
|
0.9
|
|
N
|
E:LEU142
|
4.7
|
72.2
|
0.9
|
|
SG
|
E:CYS144
|
4.8
|
77.4
|
0.9
|
|
O
|
E:CYS158
|
4.8
|
87.0
|
0.9
|
|
C
|
E:CYS158
|
4.8
|
87.2
|
0.9
|
|
N
|
E:HIS141
|
4.9
|
76.0
|
0.9
|
|
O
|
E:CYS144
|
4.9
|
74.8
|
0.9
|
|
CA
|
E:CYS144
|
4.9
|
74.7
|
0.9
|
|
CA
|
E:HIS141
|
4.9
|
75.2
|
0.9
|
|
N
|
E:CYS160
|
5.0
|
87.2
|
0.9
|
|
C
|
E:CYS139
|
5.0
|
78.5
|
0.9
|
|
N
|
E:SER163
|
5.0
|
95.4
|
0.9
|
|
Iron binding site 5 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 5 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:83.4
occ:0.91
|
FE2
|
E:FES501
|
0.0
|
83.4
|
0.9
|
|
ND1
|
E:HIS161
|
2.1
|
86.2
|
0.9
|
|
ND1
|
E:HIS141
|
2.1
|
79.7
|
0.9
|
|
S1
|
E:FES501
|
2.2
|
84.5
|
0.9
|
|
S2
|
E:FES501
|
2.2
|
85.4
|
0.9
|
|
FE1
|
E:FES501
|
2.7
|
86.1
|
0.9
|
|
CG
|
E:HIS161
|
3.1
|
87.8
|
0.9
|
|
CG
|
E:HIS141
|
3.1
|
78.0
|
0.9
|
|
CE1
|
E:HIS161
|
3.2
|
85.7
|
0.9
|
|
CE1
|
E:HIS141
|
3.2
|
78.6
|
0.9
|
|
CB
|
E:HIS161
|
3.3
|
89.5
|
0.9
|
|
CB
|
E:HIS141
|
3.3
|
76.7
|
0.9
|
|
N
|
E:HIS161
|
3.7
|
89.8
|
0.9
|
|
CB
|
E:CYS160
|
4.0
|
84.7
|
0.9
|
|
N
|
E:LEU142
|
4.0
|
72.2
|
0.9
|
|
CA
|
E:HIS161
|
4.1
|
90.9
|
0.9
|
|
CD2
|
E:HIS161
|
4.2
|
87.2
|
0.9
|
|
CD2
|
E:HIS141
|
4.2
|
77.7
|
0.9
|
|
NE2
|
E:HIS161
|
4.2
|
85.8
|
0.9
|
|
NE2
|
E:HIS141
|
4.3
|
78.0
|
0.9
|
|
SG
|
E:CYS139
|
4.3
|
82.0
|
0.9
|
|
CB
|
E:LEU142
|
4.4
|
70.0
|
0.9
|
|
C
|
E:CYS160
|
4.5
|
88.2
|
0.9
|
|
CG
|
E:LEU142
|
4.5
|
69.2
|
0.9
|
|
SG
|
E:CYS158
|
4.6
|
84.7
|
0.9
|
|
CA
|
E:HIS141
|
4.7
|
75.2
|
0.9
|
|
OG
|
E:SER163
|
4.7
|
89.6
|
0.9
|
|
CA
|
E:LEU142
|
4.8
|
71.4
|
0.9
|
|
CA
|
E:CYS160
|
4.8
|
86.8
|
0.9
|
|
C
|
E:HIS141
|
4.8
|
73.8
|
0.9
|
|
C
|
E:HIS161
|
4.8
|
92.3
|
0.9
|
|
CD1
|
E:LEU142
|
4.9
|
69.3
|
0.9
|
|
Iron binding site 6 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 6 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe501
b:40.2
occ:1.00
|
FE
|
P:HEM501
|
0.0
|
40.2
|
1.0
|
|
NA
|
P:HEM501
|
1.9
|
43.9
|
1.0
|
|
NB
|
P:HEM501
|
1.9
|
41.9
|
1.0
|
|
NC
|
P:HEM501
|
2.0
|
42.3
|
1.0
|
|
ND
|
P:HEM501
|
2.0
|
44.7
|
1.0
|
|
NE2
|
P:HIS84
|
2.0
|
39.6
|
1.0
|
|
NE2
|
P:HIS183
|
2.0
|
40.2
|
1.0
|
|
CE1
|
P:HIS183
|
2.9
|
40.7
|
1.0
|
|
CE1
|
P:HIS84
|
2.9
|
39.6
|
1.0
|
|
C4B
|
P:HEM501
|
3.0
|
41.4
|
1.0
|
|
C1C
|
P:HEM501
|
3.0
|
42.9
|
1.0
|
|
C1A
|
P:HEM501
|
3.0
|
46.0
|
1.0
|
|
C4C
|
P:HEM501
|
3.0
|
42.1
|
1.0
|
|
C4A
|
P:HEM501
|
3.0
|
44.6
|
1.0
|
|
C1D
|
P:HEM501
|
3.0
|
44.2
|
1.0
|
|
C1B
|
P:HEM501
|
3.0
|
42.6
|
1.0
|
|
C4D
|
P:HEM501
|
3.0
|
46.2
|
1.0
|
|
CD2
|
P:HIS84
|
3.0
|
40.8
|
1.0
|
|
CD2
|
P:HIS183
|
3.1
|
37.5
|
1.0
|
|
CHC
|
P:HEM501
|
3.3
|
42.2
|
1.0
|
|
CHD
|
P:HEM501
|
3.4
|
43.4
|
1.0
|
|
CHB
|
P:HEM501
|
3.4
|
42.5
|
1.0
|
|
CHA
|
P:HEM501
|
3.4
|
45.8
|
1.0
|
|
ND1
|
P:HIS183
|
4.0
|
38.8
|
1.0
|
|
ND1
|
P:HIS84
|
4.1
|
39.4
|
1.0
|
|
CG
|
P:HIS84
|
4.2
|
42.6
|
1.0
|
|
CG
|
P:HIS183
|
4.2
|
37.0
|
1.0
|
|
C3B
|
P:HEM501
|
4.2
|
41.9
|
1.0
|
|
C2A
|
P:HEM501
|
4.2
|
46.7
|
1.0
|
|
C2C
|
P:HEM501
|
4.2
|
42.5
|
1.0
|
|
C3C
|
P:HEM501
|
4.2
|
42.8
|
1.0
|
|
C3A
|
P:HEM501
|
4.2
|
44.7
|
1.0
|
|
C2D
|
P:HEM501
|
4.3
|
44.8
|
1.0
|
|
C2B
|
P:HEM501
|
4.3
|
42.9
|
1.0
|
|
C3D
|
P:HEM501
|
4.3
|
46.8
|
1.0
|
|
NE2
|
P:GLN45
|
4.9
|
42.0
|
1.0
|
|
CA
|
P:GLY49
|
4.9
|
37.9
|
1.0
|
|
Iron binding site 7 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 7 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe502
b:42.2
occ:1.00
|
FE
|
P:HEM502
|
0.0
|
42.2
|
1.0
|
|
NC
|
P:HEM502
|
1.9
|
40.0
|
1.0
|
|
ND
|
P:HEM502
|
1.9
|
41.7
|
1.0
|
|
NB
|
P:HEM502
|
1.9
|
40.5
|
1.0
|
|
NA
|
P:HEM502
|
2.0
|
39.6
|
1.0
|
|
NE2
|
P:HIS98
|
2.0
|
43.4
|
1.0
|
|
NE2
|
P:HIS197
|
2.0
|
41.3
|
1.0
|
|
C4C
|
P:HEM502
|
3.0
|
40.5
|
1.0
|
|
C4B
|
P:HEM502
|
3.0
|
40.7
|
1.0
|
|
C1C
|
P:HEM502
|
3.0
|
40.5
|
1.0
|
|
C1D
|
P:HEM502
|
3.0
|
42.1
|
1.0
|
|
CE1
|
P:HIS98
|
3.0
|
44.5
|
1.0
|
|
CE1
|
P:HIS197
|
3.0
|
41.3
|
1.0
|
|
C4D
|
P:HEM502
|
3.0
|
43.9
|
1.0
|
|
CD2
|
P:HIS197
|
3.0
|
41.4
|
1.0
|
|
CD2
|
P:HIS98
|
3.0
|
44.0
|
1.0
|
|
C1B
|
P:HEM502
|
3.0
|
39.6
|
1.0
|
|
C1A
|
P:HEM502
|
3.0
|
39.9
|
1.0
|
|
C4A
|
P:HEM502
|
3.0
|
39.0
|
1.0
|
|
CHC
|
P:HEM502
|
3.3
|
40.6
|
1.0
|
|
CHD
|
P:HEM502
|
3.3
|
40.7
|
1.0
|
|
CHA
|
P:HEM502
|
3.4
|
41.8
|
1.0
|
|
CHB
|
P:HEM502
|
3.4
|
38.0
|
1.0
|
|
ND1
|
P:HIS98
|
4.1
|
46.6
|
1.0
|
|
ND1
|
P:HIS197
|
4.1
|
40.6
|
1.0
|
|
CG
|
P:HIS197
|
4.1
|
43.5
|
1.0
|
|
CG
|
P:HIS98
|
4.1
|
46.3
|
1.0
|
|
C2C
|
P:HEM502
|
4.2
|
39.4
|
1.0
|
|
C3C
|
P:HEM502
|
4.2
|
40.2
|
1.0
|
|
C3B
|
P:HEM502
|
4.2
|
41.3
|
1.0
|
|
C2D
|
P:HEM502
|
4.2
|
43.4
|
1.0
|
|
C2B
|
P:HEM502
|
4.3
|
40.7
|
1.0
|
|
C3D
|
P:HEM502
|
4.3
|
45.9
|
1.0
|
|
C2A
|
P:HEM502
|
4.3
|
40.9
|
1.0
|
|
C3A
|
P:HEM502
|
4.3
|
39.8
|
1.0
|
|
O
|
P:HOH383
|
4.9
|
33.1
|
1.0
|
|
Iron binding site 8 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 8 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Fe501
b:60.2
occ:1.00
|
FE
|
Q:HEC501
|
0.0
|
60.2
|
1.0
|
|
NC
|
Q:HEC501
|
1.9
|
58.9
|
1.0
|
|
NB
|
Q:HEC501
|
2.0
|
55.8
|
1.0
|
|
ND
|
Q:HEC501
|
2.0
|
54.6
|
1.0
|
|
NE2
|
Q:HIS41
|
2.0
|
59.4
|
1.0
|
|
NA
|
Q:HEC501
|
2.0
|
53.8
|
1.0
|
|
SD
|
Q:MET160
|
2.2
|
62.2
|
1.0
|
|
C4C
|
Q:HEC501
|
3.0
|
60.2
|
1.0
|
|
C1C
|
Q:HEC501
|
3.0
|
59.5
|
1.0
|
|
CD2
|
Q:HIS41
|
3.0
|
61.0
|
1.0
|
|
C1D
|
Q:HEC501
|
3.0
|
54.7
|
1.0
|
|
C4B
|
Q:HEC501
|
3.0
|
56.3
|
1.0
|
|
CE1
|
Q:HIS41
|
3.0
|
60.7
|
1.0
|
|
C1B
|
Q:HEC501
|
3.0
|
54.3
|
1.0
|
|
C4D
|
Q:HEC501
|
3.0
|
53.1
|
1.0
|
|
C4A
|
Q:HEC501
|
3.0
|
51.1
|
1.0
|
|
C1A
|
Q:HEC501
|
3.1
|
51.7
|
1.0
|
|
CHD
|
Q:HEC501
|
3.3
|
57.7
|
1.0
|
|
CHC
|
Q:HEC501
|
3.3
|
57.2
|
1.0
|
|
CHB
|
Q:HEC501
|
3.4
|
52.4
|
1.0
|
|
CHA
|
Q:HEC501
|
3.4
|
52.9
|
1.0
|
|
CE
|
Q:MET160
|
3.5
|
59.8
|
1.0
|
|
CG
|
Q:MET160
|
3.6
|
62.5
|
1.0
|
|
ND1
|
Q:HIS41
|
4.1
|
61.3
|
1.0
|
|
CG
|
Q:HIS41
|
4.1
|
62.2
|
1.0
|
|
C3C
|
Q:HEC501
|
4.2
|
63.1
|
1.0
|
|
C2B
|
Q:HEC501
|
4.2
|
55.1
|
1.0
|
|
C2D
|
Q:HEC501
|
4.2
|
53.5
|
1.0
|
|
C2C
|
Q:HEC501
|
4.2
|
61.5
|
1.0
|
|
C3B
|
Q:HEC501
|
4.2
|
57.2
|
1.0
|
|
C3D
|
Q:HEC501
|
4.3
|
53.9
|
1.0
|
|
C3A
|
Q:HEC501
|
4.3
|
49.1
|
1.0
|
|
C2A
|
Q:HEC501
|
4.3
|
49.6
|
1.0
|
|
CB
|
Q:MET160
|
4.3
|
66.4
|
1.0
|
|
Iron binding site 9 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 9 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe501
b:0.1
occ:0.88
|
FE1
|
R:FES501
|
0.0
|
0.1
|
0.9
|
|
S1
|
R:FES501
|
2.2
|
0.7
|
0.9
|
|
S2
|
R:FES501
|
2.2
|
0.7
|
0.9
|
|
SG
|
R:CYS158
|
2.2
|
0.1
|
0.9
|
|
SG
|
R:CYS139
|
2.3
|
0.1
|
0.9
|
|
FE2
|
R:FES501
|
2.7
|
0.9
|
0.9
|
|
CB
|
R:CYS139
|
3.0
|
0.4
|
0.9
|
|
CB
|
R:CYS158
|
3.1
|
0.9
|
0.9
|
|
CB
|
R:HIS141
|
3.9
|
0.8
|
0.9
|
|
OG
|
R:SER163
|
4.0
|
0.2
|
0.9
|
|
CB
|
R:CYS144
|
4.1
|
96.8
|
0.9
|
|
CB
|
R:SER163
|
4.2
|
0.3
|
0.9
|
|
CB
|
R:CYS160
|
4.3
|
0.5
|
0.9
|
|
ND1
|
R:HIS141
|
4.4
|
0.7
|
0.9
|
|
CA
|
R:CYS158
|
4.5
|
1.0
|
0.9
|
|
CA
|
R:CYS139
|
4.5
|
0.0
|
0.9
|
|
N
|
R:HIS161
|
4.5
|
0.6
|
0.9
|
|
ND1
|
R:HIS161
|
4.6
|
0.9
|
0.9
|
|
CG
|
R:HIS141
|
4.6
|
0.9
|
0.9
|
|
N
|
R:CYS144
|
4.7
|
97.3
|
0.9
|
|
SG
|
R:CYS144
|
4.8
|
95.7
|
0.9
|
|
O
|
R:CYS158
|
4.8
|
0.1
|
0.9
|
|
C
|
R:CYS158
|
4.8
|
0.8
|
0.9
|
|
N
|
R:LEU142
|
4.8
|
0.1
|
0.9
|
|
CA
|
R:CYS144
|
4.9
|
97.2
|
0.9
|
|
N
|
R:CYS160
|
4.9
|
0.6
|
0.9
|
|
N
|
R:SER163
|
4.9
|
0.6
|
0.9
|
|
Iron binding site 10 out
of 10 in 3l75
Go back to
Iron Binding Sites List in 3l75
Iron binding site 10 out
of 10 in the Cytochrome BC1 Complex From Chicken with Fenamidone Bound
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cytochrome BC1 Complex From Chicken with Fenamidone Bound within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe501
b:0.9
occ:0.88
|
FE2
|
R:FES501
|
0.0
|
0.9
|
0.9
|
|
ND1
|
R:HIS141
|
2.2
|
0.7
|
0.9
|
|
ND1
|
R:HIS161
|
2.2
|
0.9
|
0.9
|
|
S2
|
R:FES501
|
2.2
|
0.7
|
0.9
|
|
S1
|
R:FES501
|
2.2
|
0.7
|
0.9
|
|
FE1
|
R:FES501
|
2.7
|
0.1
|
0.9
|
|
CG
|
R:HIS161
|
3.1
|
0.3
|
0.9
|
|
CG
|
R:HIS141
|
3.1
|
0.9
|
0.9
|
|
CE1
|
R:HIS141
|
3.2
|
0.3
|
0.9
|
|
CE1
|
R:HIS161
|
3.2
|
0.5
|
0.9
|
|
CB
|
R:HIS161
|
3.3
|
0.5
|
0.9
|
|
CB
|
R:HIS141
|
3.3
|
0.8
|
0.9
|
|
N
|
R:HIS161
|
3.7
|
0.6
|
0.9
|
|
CB
|
R:CYS160
|
4.0
|
0.5
|
0.9
|
|
CA
|
R:HIS161
|
4.1
|
0.8
|
0.9
|
|
N
|
R:LEU142
|
4.1
|
0.1
|
0.9
|
|
CD2
|
R:HIS161
|
4.2
|
0.9
|
0.9
|
|
CD2
|
R:HIS141
|
4.3
|
1.0
|
0.9
|
|
NE2
|
R:HIS161
|
4.3
|
0.1
|
0.9
|
|
NE2
|
R:HIS141
|
4.3
|
0.1
|
0.9
|
|
SG
|
R:CYS139
|
4.3
|
0.1
|
0.9
|
|
C
|
R:CYS160
|
4.5
|
0.1
|
0.9
|
|
CB
|
R:LEU142
|
4.5
|
96.8
|
0.9
|
|
SG
|
R:CYS158
|
4.6
|
0.1
|
0.9
|
|
OG
|
R:SER163
|
4.6
|
0.2
|
0.9
|
|
CG
|
R:LEU142
|
4.7
|
95.5
|
0.9
|
|
CA
|
R:HIS141
|
4.7
|
0.1
|
0.9
|
|
CD1
|
R:LEU142
|
4.8
|
95.5
|
0.9
|
|
C
|
R:HIS161
|
4.8
|
0.9
|
0.9
|
|
CA
|
R:CYS160
|
4.8
|
0.1
|
0.9
|
|
C
|
R:HIS141
|
4.9
|
0.1
|
0.9
|
|
CA
|
R:LEU142
|
4.9
|
98.3
|
0.9
|
|
Reference:
L.Huang,
E.A.Berry.
Famoxadone and Related Inhibitors Bind Like Methoxy Acrylate Inhibitors in the Qo Site of the BC1 Compl and Fix the Rieske Iron-Sulfur Protein in A Positio Close to But Distinct From That Seen with Stigmatellin and Other "Distal" Qo Inhibitors. To Be Published.
Page generated: Sun Aug 4 14:09:47 2024
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