Atomistry » Iron » PDB 3mmb-3n5r » 3mvw
Atomistry »
  Iron »
    PDB 3mmb-3n5r »
      3mvw »

Iron in PDB 3mvw: X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1

Enzymatic activity of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1

All present enzymatic activity of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1:
3.6.3.24;

Protein crystallography data

The structure of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1, PDB code: 3mvw was solved by C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.29 / 1.79
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.972, 94.583, 124.947, 90.00, 90.00, 90.00
R / Rfree (%) 15.9 / 20.4

Other elements in 3mvw:

The structure of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1 also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1 (pdb code 3mvw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1, PDB code: 3mvw:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3mvw

Go back to Iron Binding Sites List in 3mvw
Iron binding site 1 out of 2 in the X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe503

b:14.9
occ:1.00
O6 A:BHZ504 2.0 16.8 1.0
O A:HOH1036 2.1 20.9 1.0
N11 A:BHZ504 2.1 19.5 1.0
O21 A:BHZ504 2.1 14.9 1.0
O22 A:BHZ504 2.2 15.5 1.0
N8 A:BHZ504 2.2 18.7 1.0
C10 A:BHZ504 2.8 19.3 1.0
C9 A:BHZ504 2.9 16.6 1.0
C12 A:BHZ504 2.9 17.2 1.0
C20 A:BHZ504 2.9 11.0 1.0
C22 A:BHZ504 2.9 20.3 1.0
C21 A:BHZ504 3.0 19.1 1.0
C19 A:BHZ504 3.1 13.3 1.0
C6 A:BHZ504 3.1 15.7 1.0
C7 A:BHZ504 3.2 15.5 1.0
C1 A:BHZ504 3.5 11.1 1.0
O A:HOH949 3.8 31.2 1.0
O A:HOH1037 3.9 25.2 1.0
O20 A:BHZ504 4.1 12.4 1.0
O23 A:BHZ504 4.2 22.4 1.0
C5 A:BHZ504 4.3 16.2 1.0
NH2 A:ARG137 4.3 11.4 1.0
C13 A:BHZ504 4.4 18.9 1.0
C2 A:BHZ504 4.9 14.1 1.0

Iron binding site 2 out of 2 in 3mvw

Go back to Iron Binding Sites List in 3mvw
Iron binding site 2 out of 2 in the X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of X-Ray Structure of A "Nika+Iron Complex" Hybrid, Nika/1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe503

b:15.2
occ:1.00
O21 B:BHZ504 2.0 12.4 1.0
O6 B:BHZ504 2.1 16.4 1.0
O22 B:BHZ504 2.2 18.6 1.0
N8 B:BHZ504 2.2 15.8 1.0
N11 B:BHZ504 2.2 20.4 1.0
O B:HOH736 2.2 20.4 1.0
C12 B:BHZ504 2.9 20.1 1.0
C20 B:BHZ504 2.9 12.8 1.0
C10 B:BHZ504 3.0 21.1 1.0
C22 B:BHZ504 3.0 21.2 1.0
C9 B:BHZ504 3.0 18.3 1.0
C19 B:BHZ504 3.1 13.7 1.0
C21 B:BHZ504 3.1 21.2 1.0
C7 B:BHZ504 3.1 13.3 1.0
C6 B:BHZ504 3.1 13.9 1.0
C1 B:BHZ504 3.5 14.8 1.0
O B:HOH685 4.1 25.3 1.0
O20 B:BHZ504 4.1 14.7 1.0
O23 B:BHZ504 4.2 23.3 1.0
NH2 B:ARG137 4.3 10.0 1.0
C5 B:BHZ504 4.3 15.3 1.0
C13 B:BHZ504 4.4 23.5 1.0
C2 B:BHZ504 4.9 12.1 1.0

Reference:

C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage. Crystallographic Snapshots of the Reaction of Aromatic C-H with O(2) Catalysed By A Protein-Bound Iron Complex Nat.Chem. V. 2 1069 2010.
ISSN: ISSN 1755-4330
PubMed: 21107372
DOI: 10.1038/NCHEM.841
Page generated: Sun Aug 4 15:44:14 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy