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Iron in PDB 3mw0: X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2

Enzymatic activity of X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2

All present enzymatic activity of X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2:
3.6.3.24;

Protein crystallography data

The structure of X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2, PDB code: 3mw0 was solved by C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.26 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.983, 94.511, 125.105, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 24.4

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2 (pdb code 3mw0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2, PDB code: 3mw0:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3mw0

Go back to Iron Binding Sites List in 3mw0
Iron binding site 1 out of 2 in the X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe503

b:20.9
occ:1.00
O18 A:BHR504 1.8 26.9 1.0
O6 A:BHR504 1.9 26.5 1.0
N8 A:BHR504 2.2 25.0 1.0
N11 A:BHR504 2.2 27.5 1.0
O20 A:BHR504 2.2 23.9 1.0
O23 A:BHR504 2.4 27.9 1.0
C9 A:BHR504 2.9 25.4 1.0
C18 A:BHR504 2.9 28.3 1.0
C10 A:BHR504 3.0 27.2 1.0
C6 A:BHR504 3.0 26.6 1.0
C20 A:BHR504 3.0 24.4 1.0
C12 A:BHR504 3.1 27.7 1.0
C19 A:BHR504 3.1 25.2 1.0
C22 A:BHR504 3.1 27.9 1.0
C7 A:BHR504 3.2 26.3 1.0
C21 A:BHR504 3.2 27.8 1.0
C13 A:BHR504 3.4 28.4 1.0
C1 A:BHR504 3.5 26.3 1.0
C17 A:BHR504 4.1 28.9 1.0
C5 A:BHR504 4.2 28.2 1.0
O21 A:BHR504 4.2 24.9 1.0
O22 A:BHR504 4.3 28.6 1.0
NH2 A:ARG137 4.3 16.5 1.0
O5 A:BHR504 4.5 28.4 0.9
C14 A:BHR504 4.8 29.7 1.0
C2 A:BHR504 4.8 27.1 1.0

Iron binding site 2 out of 2 in 3mw0

Go back to Iron Binding Sites List in 3mw0
Iron binding site 2 out of 2 in the X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of X-Ray Structure of the Doubly Hydroxylated Iron Complex-Nika Species, NIKA1/O2 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe505

b:23.3
occ:1.00
O18 B:BHR503 1.7 29.9 1.0
O6 B:BHR503 1.9 22.2 1.0
O23 B:BHR503 2.1 30.2 1.0
N11 B:BHR503 2.2 29.0 1.0
O21 B:BHR503 2.2 21.4 1.0
N8 B:BHR503 2.2 26.4 1.0
C18 B:BHR503 2.8 29.9 1.0
C22 B:BHR503 2.9 29.8 1.0
C9 B:BHR503 3.0 27.0 1.0
C6 B:BHR503 3.0 24.6 1.0
C10 B:BHR503 3.0 28.2 1.0
C21 B:BHR503 3.0 29.4 1.0
C7 B:BHR503 3.0 25.4 1.0
C12 B:BHR503 3.0 29.3 1.0
C20 B:BHR503 3.1 22.7 1.0
C19 B:BHR503 3.2 24.0 1.0
C13 B:BHR503 3.3 29.8 1.0
C1 B:BHR503 3.4 24.9 1.0
C17 B:BHR503 4.0 31.3 1.0
O22 B:BHR503 4.1 29.9 1.0
C5 B:BHR503 4.2 26.2 1.0
O20 B:BHR503 4.3 19.5 1.0
NH2 B:ARG137 4.3 18.3 1.0
C14 B:BHR503 4.7 31.4 1.0
O5 B:BHR503 4.7 27.7 1.0
C2 B:BHR503 4.7 25.4 1.0

Reference:

C.Cavazza, C.Bochot, P.Rousselot-Pailley, P.Carpentier, M.V.Cherrier, L.Martin, C.Marchi-Delapierre, J.C.Fontecilla-Camps, S.Menage. Crystallographic Snapshots of the Reaction of Aromatic C-H with O(2) Catalysed By A Protein-Bound Iron Complex Nat.Chem. V. 2 1069 2010.
ISSN: ISSN 1755-4330
PubMed: 21107372
DOI: 10.1038/NCHEM.841
Page generated: Sun Aug 4 15:45:27 2024

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