Atomistry » Iron » PDB 3mmb-3n5r » 3n1y
Atomistry »
  Iron »
    PDB 3mmb-3n5r »
      3n1y »

Iron in PDB 3n1y: X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant

Protein crystallography data

The structure of X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant, PDB code: 3n1y was solved by M.S.Mccormick, M.H.Sazinsky, S.J.Lippard, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.10
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 182.974, 182.974, 68.710, 90.00, 90.00, 120.00
R / Rfree (%) 22.3 / 23.5

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant (pdb code 3n1y). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant, PDB code: 3n1y:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3n1y

Go back to Iron Binding Sites List in 3n1y
Iron binding site 1 out of 2 in the X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe503

b:31.3
occ:1.00
ND1 A:HIS137 2.1 30.9 1.0
OE2 A:GLU134 2.1 28.0 1.0
O A:HOH506 2.2 31.8 1.0
OE1 A:GLU104 2.2 34.8 1.0
O A:HOH505 2.2 25.9 1.0
O19 A:P6G501 2.9 53.5 1.0
CE1 A:HIS137 3.0 31.9 1.0
CD A:GLU134 3.1 29.4 1.0
FE A:FE504 3.2 37.4 1.0
CD A:GLU104 3.2 34.2 1.0
CG A:HIS137 3.2 29.0 1.0
OE1 A:GLU134 3.3 34.2 1.0
OE2 A:GLU104 3.4 32.6 1.0
CB A:HIS137 3.7 27.6 1.0
C18 A:P6G501 3.8 55.0 1.0
OE1 A:GLU231 4.0 48.8 1.0
NE2 A:HIS137 4.2 31.4 1.0
CD2 A:HIS137 4.3 31.1 1.0
CG A:GLU134 4.5 28.4 1.0
OE2 A:GLU231 4.5 43.8 1.0
CG A:GLU104 4.5 33.8 1.0
CA A:GLU134 4.6 29.9 1.0
NE2 A:HIS234 4.7 35.3 1.0
CD A:GLU231 4.7 48.2 1.0
CG2 A:ILE227 4.7 41.9 1.0
C17 A:P6G501 4.7 55.2 1.0
O16 A:P6G501 4.7 55.8 1.0
CE1 A:HIS234 4.7 37.6 1.0
CB A:GLU104 4.8 31.8 1.0
CB A:GLU134 4.9 27.1 1.0

Iron binding site 2 out of 2 in 3n1y

Go back to Iron Binding Sites List in 3n1y
Iron binding site 2 out of 2 in the X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of X-Ray Crystal Structure of Toluene/O-Xylene Monooxygenase Hydroxylase T201G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe504

b:37.4
occ:1.00
OE1 A:GLU134 2.1 34.2 1.0
O A:HOH505 2.1 25.9 1.0
OE2 A:GLU197 2.2 37.6 1.0
NE2 A:HIS234 2.3 35.3 1.0
OE2 A:GLU231 2.4 43.8 1.0
O19 A:P6G501 2.9 53.5 1.0
CD A:GLU134 3.1 29.4 1.0
FE A:FE503 3.2 31.3 1.0
CE1 A:HIS234 3.2 37.6 1.0
CD A:GLU197 3.2 37.2 1.0
CD A:GLU231 3.3 48.2 1.0
CD2 A:HIS234 3.3 34.6 1.0
OE2 A:GLU134 3.4 28.0 1.0
OE1 A:GLU231 3.6 48.8 1.0
O A:HOH604 3.6 39.8 1.0
C18 A:P6G501 3.7 55.0 1.0
CG A:GLU197 3.9 34.7 1.0
O A:HOH506 4.1 31.8 1.0
OE1 A:GLU197 4.1 37.2 1.0
ND1 A:HIS234 4.3 37.7 1.0
CG A:HIS234 4.4 36.6 1.0
CG A:GLU134 4.4 28.4 1.0
CG A:GLU231 4.6 46.5 1.0
ND1 A:HIS137 4.7 30.9 1.0
CE1 A:HIS137 4.8 31.9 1.0
CB A:GLU197 4.8 36.5 1.0
OE1 A:GLU104 4.9 34.8 1.0
C17 A:P6G501 4.9 55.2 1.0

Reference:

W.J.Song, M.S.Mccormick, R.K.Behan, M.H.Sazinsky, W.Jiang, J.Lin, C.Krebs, S.J.Lippard. Active Site Threonine Facilitates Proton Transfer During Dioxygen Activation at the Diiron Center of Toluene/O-Xylene Monooxygenase Hydroxylase. J.Am.Chem.Soc. V. 132 13582 2010.
ISSN: ISSN 0002-7863
PubMed: 20839885
DOI: 10.1021/JA1063795
Page generated: Sun Aug 4 15:48:47 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy