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Iron in PDB 3pq4: Structure of I274C Variant of E. Coli Kate[] - Images 13-18

Enzymatic activity of Structure of I274C Variant of E. Coli Kate[] - Images 13-18

All present enzymatic activity of Structure of I274C Variant of E. Coli Kate[] - Images 13-18:
1.11.1.6;

Protein crystallography data

The structure of Structure of I274C Variant of E. Coli Kate[] - Images 13-18, PDB code: 3pq4 was solved by P.C.Loewen, V.Jha, S.Louis, P.Chelikani, X.Carpena, I.Fita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.19 / 1.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 93.507, 133.031, 122.646, 90.00, 109.39, 90.00
R / Rfree (%) 14.1 / 18.9

Iron Binding Sites:

The binding sites of Iron atom in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18 (pdb code 3pq4). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18, PDB code: 3pq4:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in 3pq4

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Iron binding site 1 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe760

b:2.9
occ:0.50
 FE A:HDD760 0.0 2.9 0.5
FE A:HDE761 0.5 11.1 0.5
NC A:HDE761 1.7 8.3 0.5
OH A:TYR415 1.8 7.2 1.0
NA A:HDD760 2.0 3.0 0.5
NC A:HDD760 2.0 5.5 0.5
NB A:HDD760 2.1 7.3 0.5
NB A:HDE761 2.1 10.2 0.5
ND A:HDE761 2.1 6.6 0.5
ND A:HDD760 2.1 3.4 0.5
O A:HOH3592 2.3 14.3 1.0
NA A:HDE761 2.4 9.1 0.5
C4C A:HDE761 2.7 7.3 0.5
C1C A:HDE761 2.7 10.7 0.5
C4B A:HDE761 2.9 9.6 0.5
CZ A:TYR415 2.9 5.0 1.0
C4C A:HDD760 3.0 4.8 0.5
C4A A:HDD760 3.0 3.0 0.5
C1A A:HDD760 3.0 2.9 0.5
C1D A:HDE761 3.0 6.2 0.5
C4B A:HDD760 3.1 7.4 0.5
C1B A:HDD760 3.1 5.3 0.5
C1C A:HDD760 3.1 5.7 0.5
C1D A:HDD760 3.1 2.9 0.5
C4D A:HDD760 3.2 2.9 0.5
C1B A:HDE761 3.2 11.1 0.5
CHC A:HDE761 3.2 8.4 0.5
C4D A:HDE761 3.2 5.8 0.5
CHD A:HDE761 3.3 5.2 0.5
CHD A:HDD760 3.4 4.7 0.5
C4A A:HDE761 3.4 8.3 0.5
C1A A:HDE761 3.4 8.0 0.5
CHB A:HDD760 3.5 3.0 0.5
CHA A:HDD760 3.5 2.9 0.5
CHC A:HDD760 3.5 4.3 0.5
CE1 A:TYR415 3.6 4.4 1.0
CHA A:HDE761 3.7 7.6 0.5
CHB A:HDE761 3.8 10.7 0.5
CE2 A:TYR415 3.8 4.7 1.0
C3C A:HDE761 3.9 9.2 0.5
NE A:ARG411 3.9 5.2 1.0
C2C A:HDE761 3.9 10.3 0.5
NH2 A:ARG411 4.0 4.0 1.0
C3B A:HDE761 4.1 9.8 0.5
C3A A:HDD760 4.2 4.1 0.5
C2A A:HDD760 4.3 2.9 0.5
C3C A:HDD760 4.3 2.9 0.5
C2B A:HDE761 4.3 9.7 0.5
C3B A:HDD760 4.3 6.8 0.5
C2C A:HDD760 4.3 6.6 0.5
C2B A:HDD760 4.3 5.5 0.5
O A:HOH1080 4.3 28.8 1.0
C2D A:HDE761 4.3 6.6 0.5
C2D A:HDD760 4.4 4.7 0.5
CZ A:ARG411 4.4 9.0 1.0
C3D A:HDD760 4.4 2.9 0.5
C3D A:HDE761 4.5 5.0 0.5
NE2 A:HIS128 4.6 8.0 1.0
CZ A:PHE214 4.7 5.6 1.0
CD2 A:HIS128 4.7 5.0 1.0
C3A A:HDE761 4.7 10.8 0.5
C2A A:HDE761 4.8 8.5 0.5
CG2 A:VAL127 4.8 3.2 1.0
CD1 A:TYR415 4.9 4.8 1.0

Iron binding site 2 out of 8 in 3pq4

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Iron binding site 2 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe761

b:11.1
occ:0.50
 FE A:HDE761 0.0 11.1 0.5
FE A:HDD760 0.5 2.9 0.5
ND A:HDD760 1.7 3.4 0.5
NA A:HDE761 2.0 9.1 0.5
NB A:HDE761 2.0 10.2 0.5
NA A:HDD760 2.0 3.0 0.5
NC A:HDE761 2.0 8.3 0.5
O A:HOH3592 2.0 14.3 1.0
ND A:HDE761 2.1 6.6 0.5
NC A:HDD760 2.1 5.5 0.5
OH A:TYR415 2.2 7.2 1.0
NB A:HDD760 2.5 7.3 0.5
C4D A:HDD760 2.8 2.9 0.5
C1D A:HDD760 2.8 2.9 0.5
C1A A:HDD760 2.9 2.9 0.5
C4C A:HDD760 3.0 4.8 0.5
C4B A:HDE761 3.0 9.6 0.5
C4D A:HDE761 3.0 5.8 0.5
C1B A:HDE761 3.0 11.1 0.5
C1A A:HDE761 3.1 8.0 0.5
C4A A:HDE761 3.1 8.3 0.5
C4C A:HDE761 3.1 7.3 0.5
CZ A:TYR415 3.1 5.0 1.0
C1C A:HDE761 3.1 10.7 0.5
CHA A:HDD760 3.1 2.9 0.5
C1D A:HDE761 3.1 6.2 0.5
C4A A:HDD760 3.2 3.0 0.5
CHD A:HDD760 3.2 4.7 0.5
C1C A:HDD760 3.3 5.7 0.5
CHA A:HDE761 3.4 7.6 0.5
CHC A:HDE761 3.4 8.4 0.5
C1B A:HDD760 3.5 5.3 0.5
CHB A:HDE761 3.5 10.7 0.5
C4B A:HDD760 3.5 7.4 0.5
CHD A:HDE761 3.5 5.2 0.5
CE1 A:TYR415 3.7 4.4 1.0
CHB A:HDD760 3.7 3.0 0.5
CHC A:HDD760 3.8 4.3 0.5
CE2 A:TYR415 4.0 4.7 1.0
C2D A:HDD760 4.0 4.7 0.5
C3D A:HDD760 4.0 2.9 0.5
C2A A:HDD760 4.2 2.9 0.5
C3B A:HDE761 4.2 9.8 0.5
C2B A:HDE761 4.2 9.7 0.5
C3C A:HDD760 4.3 2.9 0.5
C3A A:HDD760 4.3 4.1 0.5
C3C A:HDE761 4.3 9.2 0.5
CG2 A:VAL127 4.3 3.2 1.0
O A:HOH1080 4.4 28.8 1.0
C2C A:HDE761 4.4 10.3 0.5
C3D A:HDE761 4.4 5.0 0.5
C2D A:HDE761 4.4 6.6 0.5
C3A A:HDE761 4.4 10.8 0.5
NE A:ARG411 4.4 5.2 1.0
C2A A:HDE761 4.4 8.5 0.5
C2C A:HDD760 4.4 6.6 0.5
NE2 A:HIS128 4.4 8.0 1.0
CD2 A:HIS128 4.5 5.0 1.0
NH2 A:ARG411 4.5 4.0 1.0
CZ A:PHE214 4.5 5.6 1.0
C3B A:HDD760 4.7 6.8 0.5
C2B A:HDD760 4.7 5.5 0.5
O1D A:HDD760 4.8 6.5 0.5
CZ A:ARG411 4.9 9.0 1.0
CD1 A:TYR415 4.9 4.8 1.0
OND A:HDD760 5.0 4.8 0.5
CMD A:HDD760 5.0 4.2 0.5

Iron binding site 3 out of 8 in 3pq4

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Iron binding site 3 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe760

b:3.5
occ:0.50
 FE B:HDD760 0.0 3.5 0.5
FE B:HDE761 0.4 14.3 0.5
NA B:HDE761 1.8 12.6 0.5
OH B:TYR415 1.8 7.5 1.0
NA B:HDD760 2.0 4.0 0.5
NB B:HDD760 2.1 4.5 0.5
NC B:HDD760 2.1 5.9 0.5
ND B:HDE761 2.1 10.4 0.5
NB B:HDE761 2.1 11.9 0.5
ND B:HDD760 2.1 5.5 0.5
NC B:HDE761 2.3 12.3 0.5
O B:HOH3593 2.5 17.2 1.0
CZ B:TYR415 2.8 7.7 1.0
C4A B:HDE761 2.8 12.8 0.5
C1A B:HDE761 2.8 12.9 0.5
C1B B:HDE761 3.0 10.9 0.5
C4A B:HDD760 3.0 3.1 0.5
C4D B:HDE761 3.0 7.7 0.5
C1A B:HDD760 3.0 3.0 0.5
C4C B:HDD760 3.1 3.1 0.5
C1B B:HDD760 3.1 3.2 0.5
C4B B:HDD760 3.1 4.5 0.5
C1D B:HDD760 3.1 5.0 0.5
C1C B:HDD760 3.1 5.6 0.5
C4D B:HDD760 3.2 4.4 0.5
C4B B:HDE761 3.2 12.0 0.5
C1D B:HDE761 3.2 7.5 0.5
C4C B:HDE761 3.2 7.8 0.5
CHB B:HDE761 3.3 11.2 0.5
CHA B:HDE761 3.3 11.2 0.5
C1C B:HDE761 3.3 12.4 0.5
CHB B:HDD760 3.4 3.2 0.5
CHD B:HDD760 3.4 4.4 0.5
CE1 B:TYR415 3.4 3.2 1.0
CHC B:HDD760 3.5 3.9 0.5
CHA B:HDD760 3.5 4.6 0.5
CHD B:HDE761 3.6 6.4 0.5
CHC B:HDE761 3.7 12.5 0.5
CE2 B:TYR415 3.8 10.4 1.0
C2A B:HDE761 4.1 13.2 0.5
NE B:ARG411 4.1 6.1 1.0
C3A B:HDE761 4.1 13.7 0.5
NH2 B:ARG411 4.2 7.5 1.0
C2B B:HDE761 4.2 10.0 0.5
C3A B:HDD760 4.2 4.0 0.5
C2A B:HDD760 4.2 3.0 0.5
C2B B:HDD760 4.3 3.7 0.5
C3B B:HDD760 4.3 8.5 0.5
C3C B:HDD760 4.3 4.5 0.5
C2C B:HDD760 4.3 6.8 0.5
C3B B:HDE761 4.3 13.1 0.5
C3D B:HDE761 4.4 6.0 0.5
C2D B:HDD760 4.4 3.0 0.5
C2D B:HDE761 4.4 7.4 0.5
C3C B:HDE761 4.4 9.0 0.5
C3D B:HDD760 4.4 5.6 0.5
O B:HOH840 4.5 31.9 1.0
C2C B:HDE761 4.5 11.6 0.5
CZ B:ARG411 4.6 11.4 1.0
NE2 B:HIS128 4.7 6.8 1.0
CZ B:PHE214 4.7 5.9 1.0
CD1 B:TYR415 4.7 5.0 1.0
CG2 B:VAL127 4.8 7.5 1.0
CD2 B:HIS128 4.8 3.2 1.0
O1A B:HDE761 4.8 15.4 0.5
ONA B:HDE761 4.9 11.6 0.5
CD2 B:TYR415 4.9 6.7 1.0

Iron binding site 4 out of 8 in 3pq4

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Iron binding site 4 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe761

b:14.3
occ:0.50
 FE B:HDE761 0.0 14.3 0.5
FE B:HDD760 0.4 3.5 0.5
NB B:HDD760 1.8 4.5 0.5
NA B:HDE761 2.0 12.6 0.5
NA B:HDD760 2.0 4.0 0.5
NB B:HDE761 2.0 11.9 0.5
NC B:HDE761 2.0 12.3 0.5
O B:HOH3593 2.1 17.2 1.0
NC B:HDD760 2.1 5.9 0.5
ND B:HDE761 2.1 10.4 0.5
OH B:TYR415 2.2 7.5 1.0
ND B:HDD760 2.4 5.5 0.5
C4B B:HDD760 2.8 4.5 0.5
C1B B:HDD760 2.9 3.2 0.5
C4A B:HDD760 2.9 3.1 0.5
C1C B:HDD760 3.0 5.6 0.5
C1B B:HDE761 3.0 10.9 0.5
C4A B:HDE761 3.0 12.8 0.5
C4C B:HDE761 3.0 7.8 0.5
C1A B:HDE761 3.0 12.9 0.5
C4B B:HDE761 3.1 12.0 0.5
C1C B:HDE761 3.1 12.4 0.5
C4D B:HDE761 3.1 7.7 0.5
C1A B:HDD760 3.1 3.0 0.5
C4C B:HDD760 3.2 3.1 0.5
C1D B:HDE761 3.2 7.5 0.5
CZ B:TYR415 3.2 7.7 1.0
CHB B:HDD760 3.2 3.2 0.5
CHC B:HDD760 3.3 3.9 0.5
C1D B:HDD760 3.3 5.0 0.5
C4D B:HDD760 3.4 4.4 0.5
CHA B:HDE761 3.4 11.2 0.5
CHB B:HDE761 3.4 11.2 0.5
CHC B:HDE761 3.4 12.5 0.5
CHD B:HDE761 3.5 6.4 0.5
CHD B:HDD760 3.6 4.4 0.5
CHA B:HDD760 3.7 4.6 0.5
CE1 B:TYR415 3.9 3.2 1.0
C3B B:HDD760 4.0 8.5 0.5
C2B B:HDD760 4.1 3.7 0.5
O B:HOH840 4.1 31.9 1.0
CE2 B:TYR415 4.2 10.4 1.0
C3A B:HDD760 4.2 4.0 0.5
C3C B:HDE761 4.2 9.0 0.5
C2C B:HDD760 4.2 6.8 0.5
C2B B:HDE761 4.2 10.0 0.5
C3B B:HDE761 4.3 13.1 0.5
NE B:ARG411 4.3 6.1 1.0
C2A B:HDD760 4.3 3.0 0.5
C2C B:HDE761 4.3 11.6 0.5
C3C B:HDD760 4.3 4.5 0.5
NH2 B:ARG411 4.4 7.5 1.0
C2A B:HDE761 4.4 13.2 0.5
NE2 B:HIS128 4.4 6.8 1.0
C3A B:HDE761 4.4 13.7 0.5
C2D B:HDE761 4.4 7.4 0.5
C3D B:HDE761 4.4 6.0 0.5
CZ B:PHE214 4.4 5.9 1.0
CD2 B:HIS128 4.5 3.2 1.0
CG2 B:VAL127 4.6 7.5 1.0
C2D B:HDD760 4.6 3.0 0.5
C3D B:HDD760 4.7 5.6 0.5
CZ B:ARG411 4.7 11.4 1.0

Iron binding site 5 out of 8 in 3pq4

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Iron binding site 5 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe760

b:4.0
occ:0.50
 FE C:HDD760 0.0 4.0 0.5
FE C:HDE761 0.4 13.3 0.5
OH C:TYR415 1.9 10.1 1.0
NA C:HDE761 1.9 10.9 0.5
NB C:HDE761 2.0 11.3 0.5
NA C:HDD760 2.0 4.5 0.5
NC C:HDD760 2.0 4.5 0.5
NB C:HDD760 2.1 6.4 0.5
NC C:HDE761 2.1 10.3 0.5
ND C:HDD760 2.2 5.4 0.5
ND C:HDE761 2.2 11.2 0.5
O C:HOH3277 2.5 14.3 1.0
CZ C:TYR415 2.9 7.5 1.0
C1B C:HDE761 2.9 9.8 0.5
C4A C:HDE761 2.9 10.7 0.5
C4B C:HDE761 3.0 11.8 0.5
C1A C:HDE761 3.0 10.2 0.5
C1C C:HDD760 3.0 7.6 0.5
C1A C:HDD760 3.0 3.1 0.5
C4A C:HDD760 3.0 4.9 0.5
C4C C:HDD760 3.1 3.9 0.5
C4B C:HDD760 3.1 7.3 0.5
C1C C:HDE761 3.1 11.5 0.5
C1B C:HDD760 3.1 5.4 0.5
C4C C:HDE761 3.1 9.1 0.5
C4D C:HDE761 3.2 9.7 0.5
C4D C:HDD760 3.2 2.9 0.5
C1D C:HDD760 3.2 2.9 0.5
C1D C:HDE761 3.3 10.4 0.5
CHB C:HDE761 3.4 8.8 0.5
CHC C:HDD760 3.4 4.7 0.5
CHC C:HDE761 3.5 10.8 0.5
CHA C:HDD760 3.5 4.8 0.5
CHB C:HDD760 3.5 3.1 0.5
CHA C:HDE761 3.5 10.8 0.5
CHD C:HDD760 3.5 2.9 0.5
CE1 C:TYR415 3.6 4.5 1.0
CHD C:HDE761 3.6 9.1 0.5
CE2 C:TYR415 3.8 8.8 1.0
NE C:ARG411 4.0 4.3 1.0
C2B C:HDE761 4.1 11.4 0.5
C3B C:HDE761 4.1 10.2 0.5
NH2 C:ARG411 4.2 6.1 1.0
C2A C:HDE761 4.2 11.1 0.5
C2C C:HDD760 4.2 6.3 0.5
C3C C:HDD760 4.3 4.3 0.5
C3A C:HDE761 4.3 11.1 0.5
C3A C:HDD760 4.3 3.5 0.5
C2A C:HDD760 4.3 3.0 0.5
O C:HOH1263 4.3 28.3 1.0
C3C C:HDE761 4.3 10.2 0.5
C3B C:HDD760 4.3 8.9 0.5
C2C C:HDE761 4.3 12.3 0.5
C2B C:HDD760 4.3 6.9 0.5
C3D C:HDD760 4.5 3.7 0.5
C2D C:HDE761 4.5 8.2 0.5
C3D C:HDE761 4.5 8.3 0.5
C2D C:HDD760 4.5 3.5 0.5
CZ C:ARG411 4.5 9.7 1.0
NE2 C:HIS128 4.7 6.3 1.0
CZ C:PHE214 4.7 6.3 1.0
CD2 C:HIS128 4.8 4.5 1.0
CG2 C:VAL127 4.8 5.9 1.0
CD1 C:TYR415 4.9 5.3 1.0
O1A C:HDE761 4.9 14.6 0.5

Iron binding site 6 out of 8 in 3pq4

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Iron binding site 6 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe761

b:13.3
occ:0.50
 FE C:HDE761 0.0 13.3 0.5
FE C:HDD760 0.4 4.0 0.5
NA C:HDD760 1.9 4.5 0.5
NA C:HDE761 2.0 10.9 0.5
NB C:HDE761 2.0 11.3 0.5
NC C:HDE761 2.0 10.3 0.5
NB C:HDD760 2.0 6.4 0.5
ND C:HDE761 2.1 11.2 0.5
O C:HOH3277 2.2 14.3 1.0
NC C:HDD760 2.2 4.5 0.5
OH C:TYR415 2.2 10.1 1.0
ND C:HDD760 2.3 5.4 0.5
C4A C:HDD760 2.9 4.9 0.5
C1A C:HDD760 2.9 3.1 0.5
C1A C:HDE761 3.0 10.2 0.5
C1B C:HDE761 3.0 9.8 0.5
C4B C:HDE761 3.0 11.8 0.5
C1B C:HDD760 3.0 5.4 0.5
C4A C:HDE761 3.0 10.7 0.5
C4C C:HDE761 3.1 9.1 0.5
C4B C:HDD760 3.1 7.3 0.5
C1C C:HDE761 3.1 11.5 0.5
C4D C:HDE761 3.1 9.7 0.5
C1C C:HDD760 3.1 7.6 0.5
C1D C:HDE761 3.2 10.4 0.5
C4D C:HDD760 3.2 2.9 0.5
C4C C:HDD760 3.2 3.9 0.5
CZ C:TYR415 3.2 7.5 1.0
C1D C:HDD760 3.3 2.9 0.5
CHB C:HDD760 3.4 3.1 0.5
CHA C:HDE761 3.4 10.8 0.5
CHA C:HDD760 3.4 4.8 0.5
CHC C:HDE761 3.4 10.8 0.5
CHC C:HDD760 3.5 4.7 0.5
CHB C:HDE761 3.5 8.8 0.5
CHD C:HDE761 3.5 9.1 0.5
CHD C:HDD760 3.7 2.9 0.5
CE1 C:TYR415 3.9 4.5 1.0
O C:HOH1263 4.0 28.3 1.0
CE2 C:TYR415 4.1 8.8 1.0
C3A C:HDD760 4.1 3.5 0.5
C2A C:HDD760 4.2 3.0 0.5
C3B C:HDE761 4.2 10.2 0.5
C2B C:HDE761 4.2 11.4 0.5
C3B C:HDD760 4.3 8.9 0.5
C2B C:HDD760 4.3 6.9 0.5
C3C C:HDE761 4.3 10.2 0.5
NE C:ARG411 4.3 4.3 1.0
C2A C:HDE761 4.3 11.1 0.5
C2C C:HDE761 4.3 12.3 0.5
NE2 C:HIS128 4.3 6.3 1.0
C3A C:HDE761 4.3 11.1 0.5
C2C C:HDD760 4.3 6.3 0.5
C3C C:HDD760 4.4 4.3 0.5
NH2 C:ARG411 4.4 6.1 1.0
C2D C:HDE761 4.4 8.2 0.5
C3D C:HDE761 4.4 8.3 0.5
CD2 C:HIS128 4.5 4.5 1.0
C3D C:HDD760 4.5 3.7 0.5
CZ C:PHE214 4.5 6.3 1.0
CG2 C:VAL127 4.6 5.9 1.0
C2D C:HDD760 4.6 3.5 0.5
CZ C:ARG411 4.8 9.7 1.0

Iron binding site 7 out of 8 in 3pq4

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Iron binding site 7 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe760

b:3.1
occ:0.50
 FE D:HDD760 0.0 3.1 0.5
FE D:HDE761 0.3 13.2 0.5
NA D:HDE761 1.9 10.5 0.5
OH D:TYR415 1.9 7.5 1.0
NA D:HDD760 1.9 4.5 0.5
NB D:HDE761 2.0 9.6 0.5
NC D:HDD760 2.1 3.6 0.5
NB D:HDD760 2.1 6.0 0.5
ND D:HDE761 2.1 10.2 0.5
NC D:HDE761 2.1 10.2 0.5
ND D:HDD760 2.2 5.3 0.5
O D:HOH3252 2.5 14.2 1.0
CZ D:TYR415 2.9 6.6 1.0
C4A D:HDD760 3.0 2.9 0.5
C4A D:HDE761 3.0 11.5 0.5
C1A D:HDE761 3.0 9.8 0.5
C1B D:HDE761 3.0 8.0 0.5
C1A D:HDD760 3.0 2.8 0.5
C4B D:HDE761 3.1 8.1 0.5
C4D D:HDE761 3.1 8.8 0.5
C1B D:HDD760 3.1 4.8 0.5
C4C D:HDD760 3.1 2.9 0.5
C4C D:HDE761 3.1 9.2 0.5
C1C D:HDD760 3.1 2.9 0.5
C4B D:HDD760 3.1 6.9 0.5
C1C D:HDE761 3.2 8.7 0.5
C1D D:HDD760 3.2 3.8 0.5
C1D D:HDE761 3.2 8.3 0.5
C4D D:HDD760 3.3 2.8 0.5
CHB D:HDD760 3.4 4.2 0.5
CHA D:HDE761 3.4 6.5 0.5
CHB D:HDE761 3.4 6.8 0.5
CHD D:HDD760 3.5 2.8 0.5
CHC D:HDE761 3.5 5.7 0.5
CHC D:HDD760 3.5 5.5 0.5
CHA D:HDD760 3.5 2.8 0.5
CHD D:HDE761 3.6 9.2 0.5
CE1 D:TYR415 3.6 4.1 1.0
CE2 D:TYR415 3.8 7.6 1.0
NE D:ARG411 4.0 6.1 1.0
NH2 D:ARG411 4.1 7.1 1.0
C2B D:HDE761 4.2 10.0 0.5
C3A D:HDD760 4.2 2.9 0.5
C3B D:HDE761 4.2 7.9 0.5
C2A D:HDD760 4.2 2.8 0.5
C2A D:HDE761 4.2 11.5 0.5
C3A D:HDE761 4.3 13.0 0.5
C3C D:HDD760 4.3 4.5 0.5
C3C D:HDE761 4.3 8.8 0.5
C2C D:HDD760 4.3 3.3 0.5
C3B D:HDD760 4.3 9.3 0.5
C2B D:HDD760 4.3 6.2 0.5
C2C D:HDE761 4.4 11.6 0.5
C3D D:HDE761 4.4 7.2 0.5
C2D D:HDE761 4.4 5.7 0.5
C2D D:HDD760 4.4 5.9 0.5
C3D D:HDD760 4.5 3.0 0.5
CZ D:ARG411 4.5 7.0 1.0
O D:HOH1264 4.6 28.3 1.0
NE2 D:HIS128 4.6 5.5 1.0
CZ D:PHE214 4.7 7.2 1.0
CG2 D:VAL127 4.7 3.1 1.0
CD2 D:HIS128 4.8 3.7 1.0
CD1 D:TYR415 4.9 7.2 1.0
O1A D:HDE761 5.0 15.2 0.5
CD2 D:TYR415 5.0 7.2 1.0

Iron binding site 8 out of 8 in 3pq4

Go back to Iron Binding Sites List in 3pq4
Iron binding site 8 out of 8 in the Structure of I274C Variant of E. Coli Kate[] - Images 13-18


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of I274C Variant of E. Coli Kate[] - Images 13-18 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe761

b:13.2
occ:0.50
 FE D:HDE761 0.0 13.2 0.5
FE D:HDD760 0.3 3.1 0.5
NA D:HDD760 1.9 4.5 0.5
NA D:HDE761 2.0 10.5 0.5
NB D:HDE761 2.0 9.6 0.5
NC D:HDE761 2.0 10.2 0.5
NB D:HDD760 2.0 6.0 0.5
ND D:HDE761 2.1 10.2 0.5
NC D:HDD760 2.1 3.6 0.5
O D:HOH3252 2.1 14.2 1.0
OH D:TYR415 2.2 7.5 1.0
ND D:HDD760 2.3 5.3 0.5
C4A D:HDD760 2.9 2.9 0.5
C4B D:HDE761 3.0 8.1 0.5
C1B D:HDD760 3.0 4.8 0.5
C1A D:HDD760 3.0 2.8 0.5
C4C D:HDE761 3.0 9.2 0.5
C1A D:HDE761 3.0 9.8 0.5
C1B D:HDE761 3.1 8.0 0.5
C1C D:HDE761 3.1 8.7 0.5
C4B D:HDD760 3.1 6.9 0.5
C4A D:HDE761 3.1 11.5 0.5
C4D D:HDE761 3.1 8.8 0.5
C1C D:HDD760 3.1 2.9 0.5
C4C D:HDD760 3.2 2.9 0.5
C1D D:HDE761 3.2 8.3 0.5
CZ D:TYR415 3.2 6.6 1.0
C1D D:HDD760 3.3 3.8 0.5
C4D D:HDD760 3.3 2.8 0.5
CHB D:HDD760 3.3 4.2 0.5
CHC D:HDE761 3.4 5.7 0.5
CHA D:HDE761 3.4 6.5 0.5
CHC D:HDD760 3.5 5.5 0.5
CHB D:HDE761 3.5 6.8 0.5
CHD D:HDE761 3.5 9.2 0.5
CHA D:HDD760 3.6 2.8 0.5
CHD D:HDD760 3.6 2.8 0.5
CE1 D:TYR415 3.9 4.1 1.0
CE2 D:TYR415 4.1 7.6 1.0
C3A D:HDD760 4.2 2.9 0.5
C3B D:HDE761 4.2 7.9 0.5
C2A D:HDD760 4.2 2.8 0.5
C2B D:HDE761 4.2 10.0 0.5
C3C D:HDE761 4.3 8.8 0.5
C3B D:HDD760 4.3 9.3 0.5
NE D:ARG411 4.3 6.1 1.0
C2B D:HDD760 4.3 6.2 0.5
C2C D:HDE761 4.3 11.6 0.5
O D:HOH1264 4.3 28.3 1.0
NH2 D:ARG411 4.3 7.1 1.0
C2C D:HDD760 4.3 3.3 0.5
C3C D:HDD760 4.3 4.5 0.5
C2A D:HDE761 4.4 11.5 0.5
C3A D:HDE761 4.4 13.0 0.5
C2D D:HDE761 4.4 5.7 0.5
NE2 D:HIS128 4.4 5.5 1.0
C3D D:HDE761 4.4 7.2 0.5
CZ D:PHE214 4.5 7.2 1.0
CG2 D:VAL127 4.5 3.1 1.0
C2D D:HDD760 4.5 5.9 0.5
CD2 D:HIS128 4.5 3.7 1.0
C3D D:HDD760 4.6 3.0 0.5
CZ D:ARG411 4.7 7.0 1.0

Reference:

V.Jha, S.Louis, P.Chelikani, X.Carpena, L.J.Donald, I.Fita, P.C.Loewen. Modulation of Heme Orientation and Binding By A Single Residue in Catalase Hpii of Escherichia Coli. Biochemistry V. 50 2101 2011.
ISSN: ISSN 0006-2960
PubMed: 21332158
DOI: 10.1021/BI200027V
Page generated: Tue Aug 5 05:49:26 2025

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