Iron in PDB 3qjc: Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form
Protein crystallography data
The structure of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form, PDB code: 3qjc
was solved by
I.Birukou,
J.Soman,
J.S.Olson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
51.37 /
2.00
|
Space group
|
P 41 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
53.300,
53.300,
192.700,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.4 /
25
|
Iron Binding Sites:
The binding sites of Iron atom in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form
(pdb code 3qjc). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form, PDB code: 3qjc:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 3qjc
Go back to
Iron Binding Sites List in 3qjc
Iron binding site 1 out
of 2 in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe142
b:20.4
occ:1.00
|
FE
|
A:HEM142
|
0.0
|
20.4
|
1.0
|
C
|
A:CMO143
|
1.8
|
15.7
|
1.0
|
NC
|
A:HEM142
|
2.0
|
17.7
|
1.0
|
NB
|
A:HEM142
|
2.0
|
18.5
|
1.0
|
NA
|
A:HEM142
|
2.1
|
19.0
|
1.0
|
ND
|
A:HEM142
|
2.1
|
17.2
|
1.0
|
NE2
|
A:HIS87
|
2.2
|
15.6
|
1.0
|
O
|
A:CMO143
|
3.0
|
28.5
|
1.0
|
C4B
|
A:HEM142
|
3.0
|
18.5
|
1.0
|
C1C
|
A:HEM142
|
3.0
|
18.7
|
1.0
|
C4C
|
A:HEM142
|
3.0
|
16.5
|
1.0
|
C1B
|
A:HEM142
|
3.1
|
19.4
|
1.0
|
C1A
|
A:HEM142
|
3.1
|
22.6
|
1.0
|
C4A
|
A:HEM142
|
3.1
|
15.7
|
1.0
|
C1D
|
A:HEM142
|
3.1
|
14.3
|
1.0
|
C4D
|
A:HEM142
|
3.1
|
19.5
|
1.0
|
CE1
|
A:HIS87
|
3.2
|
24.9
|
1.0
|
CD2
|
A:HIS87
|
3.2
|
24.2
|
1.0
|
CHC
|
A:HEM142
|
3.4
|
18.3
|
1.0
|
CHD
|
A:HEM142
|
3.5
|
19.4
|
1.0
|
CHA
|
A:HEM142
|
3.5
|
16.8
|
1.0
|
CHB
|
A:HEM142
|
3.5
|
15.7
|
1.0
|
C3B
|
A:HEM142
|
4.3
|
17.9
|
1.0
|
C2C
|
A:HEM142
|
4.3
|
26.2
|
1.0
|
C3C
|
A:HEM142
|
4.3
|
19.1
|
1.0
|
ND1
|
A:HIS87
|
4.3
|
22.4
|
1.0
|
C2B
|
A:HEM142
|
4.3
|
17.9
|
1.0
|
C2A
|
A:HEM142
|
4.3
|
20.2
|
1.0
|
CG
|
A:HIS87
|
4.3
|
25.9
|
1.0
|
C3A
|
A:HEM142
|
4.3
|
22.2
|
1.0
|
C2D
|
A:HEM142
|
4.3
|
14.4
|
1.0
|
C3D
|
A:HEM142
|
4.4
|
19.7
|
1.0
|
NE2
|
A:HIS58
|
4.4
|
20.4
|
1.0
|
CD1
|
A:LEU91
|
5.0
|
21.9
|
1.0
|
|
Iron binding site 2 out
of 2 in 3qjc
Go back to
Iron Binding Sites List in 3qjc
Iron binding site 2 out
of 2 in the Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Human Hemoglobin A Mutant Beta H63L Carbonmonoxy-Form within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe147
b:23.6
occ:1.00
|
FE
|
B:HEM147
|
0.0
|
23.6
|
1.0
|
C
|
B:CMO148
|
1.6
|
21.0
|
1.0
|
NA
|
B:HEM147
|
2.0
|
23.3
|
1.0
|
NB
|
B:HEM147
|
2.1
|
18.2
|
1.0
|
NE2
|
B:HIS92
|
2.1
|
22.1
|
1.0
|
NC
|
B:HEM147
|
2.1
|
22.4
|
1.0
|
ND
|
B:HEM147
|
2.1
|
22.4
|
1.0
|
O
|
B:CMO148
|
2.8
|
21.7
|
1.0
|
C4A
|
B:HEM147
|
3.0
|
21.7
|
1.0
|
C1A
|
B:HEM147
|
3.1
|
21.9
|
1.0
|
CD2
|
B:HIS92
|
3.1
|
23.1
|
1.0
|
CE1
|
B:HIS92
|
3.1
|
25.2
|
1.0
|
C1B
|
B:HEM147
|
3.1
|
18.0
|
1.0
|
C4B
|
B:HEM147
|
3.1
|
21.0
|
1.0
|
C4D
|
B:HEM147
|
3.1
|
22.7
|
1.0
|
C4C
|
B:HEM147
|
3.1
|
24.7
|
1.0
|
C1C
|
B:HEM147
|
3.1
|
19.4
|
1.0
|
C1D
|
B:HEM147
|
3.1
|
24.7
|
1.0
|
CHA
|
B:HEM147
|
3.4
|
20.6
|
1.0
|
CHB
|
B:HEM147
|
3.4
|
20.2
|
1.0
|
CHC
|
B:HEM147
|
3.5
|
18.4
|
1.0
|
CHD
|
B:HEM147
|
3.5
|
20.4
|
1.0
|
ND1
|
B:HIS92
|
4.2
|
25.5
|
1.0
|
CG
|
B:HIS92
|
4.2
|
23.2
|
1.0
|
C3A
|
B:HEM147
|
4.2
|
19.0
|
1.0
|
C2A
|
B:HEM147
|
4.3
|
20.0
|
1.0
|
C3C
|
B:HEM147
|
4.3
|
18.9
|
1.0
|
C3B
|
B:HEM147
|
4.3
|
19.9
|
1.0
|
C2B
|
B:HEM147
|
4.3
|
25.2
|
1.0
|
C2C
|
B:HEM147
|
4.3
|
17.8
|
1.0
|
C3D
|
B:HEM147
|
4.3
|
25.3
|
1.0
|
C2D
|
B:HEM147
|
4.4
|
28.0
|
1.0
|
CG2
|
B:VAL67
|
4.7
|
18.0
|
1.0
|
|
Reference:
I.Birukou,
J.Soman,
J.S.Olson.
Determination of Pathways For Oxygen Binding to Human Hba Thesis.
Page generated: Sun Aug 4 18:43:09 2024
|