Iron in PDB 3qm8: Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution

The structure of Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution, PDB code: 3qm8 was solved by V.S.De Serrano, M.M.Rodriguez, E.R.Schreiter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.20 / 0.91
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	34.318, 51.592, 38.561, 90.00, 104.64, 90.00
R / Rfree (%)	14.6 / 16.4

The binding sites of Iron atom in the Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution (pdb code 3qm8). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution, PDB code: 3qm8:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:5.3 occ:0.76 FE A:HEM201 0.0 5.3 0.8 FE A:HEM201 0.3 5.4 0.2 NA A:HEM201 1.8 12.4 0.2 NB A:HEM201 2.0 9.5 0.2 ND A:HEM201 2.0 4.8 0.8 C A:CYN202 2.0 7.0 1.0 NE2 A:HIS89 2.0 5.2 1.0 NC A:HEM201 2.0 5.2 0.8 NA A:HEM201 2.0 5.5 0.8 NB A:HEM201 2.0 6.7 0.8 ND A:HEM201 2.1 5.8 0.2 NC A:HEM201 2.2 5.9 0.2 C4A A:HEM201 2.8 13.9 0.2 C1A A:HEM201 2.9 10.7 0.2 C1B A:HEM201 2.9 10.6 0.2 CE1 A:HIS89 3.0 6.9 1.0 C4D A:HEM201 3.0 5.3 0.2 C4D A:HEM201 3.0 5.3 0.8 C1D A:HEM201 3.0 5.2 0.8 C4B A:HEM201 3.0 7.9 0.2 C4C A:HEM201 3.0 5.5 0.8 CD2 A:HIS89 3.1 5.2 1.0 C4A A:HEM201 3.1 6.5 0.8 C1C A:HEM201 3.1 6.2 0.8 C1A A:HEM201 3.1 5.7 0.8 C1B A:HEM201 3.1 6.5 0.8 C4B A:HEM201 3.1 6.7 0.8 C1D A:HEM201 3.1 5.3 0.2 N A:CYN202 3.1 10.0 1.0 C1C A:HEM201 3.1 7.4 0.2 C4C A:HEM201 3.2 7.0 0.2 CHB A:HEM201 3.2 12.6 0.2 CHA A:HEM201 3.3 7.0 0.2 CHD A:HEM201 3.4 5.6 0.8 CHA A:HEM201 3.4 6.2 0.8 CHB A:HEM201 3.4 6.8 0.8 CHC A:HEM201 3.4 7.3 0.8 CHC A:HEM201 3.5 6.2 0.2 CHD A:HEM201 3.6 6.5 0.2 C3A A:HEM201 4.1 14.1 0.2 C2A A:HEM201 4.1 13.3 0.2 C2B A:HEM201 4.1 11.9 0.2 ND1 A:HIS89 4.1 7.0 1.0 C3D A:HEM201 4.1 6.7 0.4 C3B A:HEM201 4.2 8.2 0.2 CG A:HIS89 4.2 5.3 1.0 C2D A:HEM201 4.2 5.9 0.8 C3D A:HEM201 4.3 7.1 0.2 C3C A:HEM201 4.3 6.0 0.8 C3D A:HEM201 4.3 5.6 0.4 C2A A:HEM201 4.3 5.9 0.4 C3A A:HEM201 4.3 7.5 0.8 C2C A:HEM201 4.3 6.8 0.8 C2B A:HEM201 4.3 6.9 0.8 C2D A:HEM201 4.3 5.4 0.2 C3B A:HEM201 4.3 7.9 0.8 C2A A:HEM201 4.3 6.9 0.4 C2C A:HEM201 4.4 7.5 0.2 C3C A:HEM201 4.5 7.8 0.2 NE2 A:HIS60 4.5 10.6 1.0 CG2 A:VAL64 4.7 9.7 1.0 CD2 A:HIS93 5.0 7.5 1.0

Iron binding site 2 out of 2 in the Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Blackfin Tuna Cyanomet-Myoglobin, Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:5.4 occ:0.24 FE A:HEM201 0.0 5.4 0.2 FE A:HEM201 0.3 5.3 0.8 C A:CYN202 1.8 7.0 1.0 NB A:HEM201 1.8 6.7 0.8 NC A:HEM201 1.9 5.9 0.2 NA A:HEM201 2.0 12.4 0.2 NB A:HEM201 2.0 9.5 0.2 ND A:HEM201 2.0 5.8 0.2 NA A:HEM201 2.0 5.5 0.8 NC A:HEM201 2.1 5.2 0.8 ND A:HEM201 2.2 4.8 0.8 NE2 A:HIS89 2.2 5.2 1.0 C1B A:HEM201 2.9 6.5 0.8 C4B A:HEM201 2.9 6.7 0.8 C4A A:HEM201 2.9 6.5 0.8 C1C A:HEM201 2.9 7.4 0.2 C4B A:HEM201 3.0 7.9 0.2 N A:CYN202 3.0 10.0 1.0 C4C A:HEM201 3.0 7.0 0.2 C1D A:HEM201 3.0 5.3 0.2 C4D A:HEM201 3.0 5.3 0.2 C1B A:HEM201 3.0 10.6 0.2 C1C A:HEM201 3.0 6.2 0.8 C4A A:HEM201 3.0 13.9 0.2 C1A A:HEM201 3.0 10.7 0.2 C1A A:HEM201 3.1 5.7 0.8 CE1 A:HIS89 3.1 6.9 1.0 C4C A:HEM201 3.2 5.5 0.8 C4D A:HEM201 3.2 5.3 0.8 C1D A:HEM201 3.2 5.2 0.8 CHB A:HEM201 3.2 6.8 0.8 CD2 A:HIS89 3.3 5.2 1.0 CHC A:HEM201 3.3 7.3 0.8 CHC A:HEM201 3.3 6.2 0.2 CHD A:HEM201 3.4 6.5 0.2 CHA A:HEM201 3.4 7.0 0.2 CHB A:HEM201 3.4 12.6 0.2 CHA A:HEM201 3.5 6.2 0.8 CHD A:HEM201 3.6 5.6 0.8 C2B A:HEM201 4.1 6.9 0.8 C3B A:HEM201 4.1 7.9 0.8 C2C A:HEM201 4.1 7.5 0.2 C3B A:HEM201 4.1 8.2 0.2 C2B A:HEM201 4.2 11.9 0.2 C3C A:HEM201 4.2 7.8 0.2 C2D A:HEM201 4.2 5.4 0.2 C3A A:HEM201 4.2 7.5 0.8 C3D A:HEM201 4.2 7.1 0.2 C3A A:HEM201 4.3 14.1 0.2 C2A A:HEM201 4.3 5.9 0.4 C2A A:HEM201 4.3 13.3 0.2 C2C A:HEM201 4.3 6.8 0.8 ND1 A:HIS89 4.3 7.0 1.0 C2A A:HEM201 4.3 6.9 0.4 C3D A:HEM201 4.3 6.7 0.4 C3C A:HEM201 4.4 6.0 0.8 CG2 A:VAL64 4.4 9.7 1.0 CG A:HIS89 4.4 5.3 1.0 NE2 A:HIS60 4.5 10.6 1.0 C2D A:HEM201 4.5 5.9 0.8 C3D A:HEM201 4.5 5.6 0.4

V.S.De Serrano, M.M.Rodriguez, E.R.Schreiter. High Resolution Structures of Blackfin Tuna Myoglobin To Be Published.