Iron in PDB 3qm9: Blackfin Tuna Azido-Myoglobin, Atomic Resolution

The structure of Blackfin Tuna Azido-Myoglobin, Atomic Resolution, PDB code: 3qm9 was solved by V.S.De Serrano, M.M.Rodriguez, E.R.Schreiter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.27 / 0.91
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	34.008, 51.894, 38.644, 90.00, 103.95, 90.00
R / Rfree (%)	12 / 13.3

The binding sites of Iron atom in the Blackfin Tuna Azido-Myoglobin, Atomic Resolution (pdb code 3qm9). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Blackfin Tuna Azido-Myoglobin, Atomic Resolution, PDB code: 3qm9:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Blackfin Tuna Azido-Myoglobin, Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Blackfin Tuna Azido-Myoglobin, Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:3.9 occ:0.75 FE A:HEM201 0.0 3.9 0.8 FE A:HEM201 0.3 5.2 0.2 NB A:HEM201 1.9 6.3 0.2 O A:HOH339 1.9 13.2 0.3 NE2 A:HIS89 2.0 4.7 1.0 ND A:HEM201 2.0 4.4 0.8 NA A:HEM201 2.0 4.3 0.8 NB A:HEM201 2.0 4.5 0.8 NA A:HEM201 2.0 4.6 0.2 ND A:HEM201 2.0 6.0 0.2 NC A:HEM201 2.0 4.4 0.8 N1 A:AZI202 2.1 4.5 0.7 NC A:HEM201 2.1 5.9 0.2 C1B A:HEM201 2.9 5.8 0.2 N2 A:AZI202 2.9 6.0 0.7 C4B A:HEM201 3.0 7.7 0.2 CE1 A:HIS89 3.0 6.4 1.0 C4D A:HEM201 3.0 4.3 0.8 C4D A:HEM201 3.0 5.3 0.2 C4A A:HEM201 3.0 4.6 0.2 C1D A:HEM201 3.0 4.3 0.8 CD2 A:HIS89 3.0 4.7 1.0 C4B A:HEM201 3.0 5.2 0.8 C4A A:HEM201 3.1 4.9 0.8 C1A A:HEM201 3.1 4.3 0.8 C1B A:HEM201 3.1 5.4 0.8 C4C A:HEM201 3.1 4.6 0.8 C1C A:HEM201 3.1 4.8 0.8 C1D A:HEM201 3.1 6.3 0.2 C4C A:HEM201 3.1 5.8 0.2 C1A A:HEM201 3.1 5.8 0.2 C1C A:HEM201 3.1 6.0 0.2 CHB A:HEM201 3.4 8.0 0.2 CHA A:HEM201 3.4 5.0 0.8 CHD A:HEM201 3.4 4.0 0.8 CHC A:HEM201 3.4 5.8 0.8 CHD A:HEM201 3.4 6.2 0.2 CHA A:HEM201 3.4 6.7 0.2 CHB A:HEM201 3.5 5.2 0.8 CHC A:HEM201 3.5 5.3 0.2 N3 A:AZI202 3.9 6.9 0.7 C2B A:HEM201 4.1 8.3 0.2 ND1 A:HIS89 4.1 6.8 1.0 C3B A:HEM201 4.1 6.6 0.2 CG A:HIS89 4.2 4.5 1.0 C3D A:HEM201 4.2 5.4 0.2 C3D A:HEM201 4.3 4.7 0.8 C3A A:HEM201 4.3 7.1 0.2 C2D A:HEM201 4.3 4.4 0.8 C2D A:HEM201 4.3 4.8 0.2 C2C A:HEM201 4.3 6.2 0.2 C3A A:HEM201 4.3 5.7 0.8 C3C A:HEM201 4.3 7.4 0.2 C3C A:HEM201 4.3 4.4 0.8 C2A A:HEM201 4.3 5.5 0.8 C2C A:HEM201 4.3 5.2 0.8 C2B A:HEM201 4.3 5.8 0.8 C3B A:HEM201 4.3 6.3 0.8 C2A A:HEM201 4.3 5.3 0.2 NE2 A:HIS60 4.4 6.8 1.0 CG2 A:VAL64 4.7 7.5 1.0 CE1 A:HIS60 4.9 7.6 1.0

Iron binding site 2 out of 2 in the Blackfin Tuna Azido-Myoglobin, Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Blackfin Tuna Azido-Myoglobin, Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:5.2 occ:0.25 FE A:HEM201 0.0 5.2 0.2 FE A:HEM201 0.3 3.9 0.8 O A:HOH339 1.6 13.2 0.3 N1 A:AZI202 1.8 4.5 0.7 NB A:HEM201 1.9 6.3 0.2 NB A:HEM201 1.9 4.5 0.8 NC A:HEM201 2.0 5.9 0.2 ND A:HEM201 2.0 6.0 0.2 NA A:HEM201 2.0 4.3 0.8 NC A:HEM201 2.1 4.4 0.8 ND A:HEM201 2.1 4.4 0.8 NA A:HEM201 2.1 4.6 0.2 NE2 A:HIS89 2.3 4.7 1.0 N2 A:AZI202 2.6 6.0 0.7 C4B A:HEM201 2.9 7.7 0.2 C1B A:HEM201 3.0 5.8 0.2 C4B A:HEM201 3.0 5.2 0.8 C4C A:HEM201 3.0 5.8 0.2 C1B A:HEM201 3.0 5.4 0.8 C1D A:HEM201 3.0 6.3 0.2 C4A A:HEM201 3.0 4.9 0.8 C4D A:HEM201 3.0 5.3 0.2 C1C A:HEM201 3.0 6.0 0.2 C1C A:HEM201 3.1 4.8 0.8 C4D A:HEM201 3.1 4.3 0.8 C1D A:HEM201 3.1 4.3 0.8 C4C A:HEM201 3.1 4.6 0.8 C1A A:HEM201 3.1 4.3 0.8 C4A A:HEM201 3.1 4.6 0.2 C1A A:HEM201 3.2 5.8 0.2 CE1 A:HIS89 3.3 6.4 1.0 CHD A:HEM201 3.3 6.2 0.2 CD2 A:HIS89 3.3 4.7 1.0 CHC A:HEM201 3.4 5.8 0.8 CHB A:HEM201 3.4 5.2 0.8 CHC A:HEM201 3.4 5.3 0.2 CHA A:HEM201 3.5 5.0 0.8 CHD A:HEM201 3.5 4.0 0.8 CHB A:HEM201 3.5 8.0 0.2 CHA A:HEM201 3.5 6.7 0.2 N3 A:AZI202 3.6 6.9 0.7 C2B A:HEM201 4.1 8.3 0.2 C3B A:HEM201 4.1 6.6 0.2 NE2 A:HIS60 4.1 6.8 1.0 C2C A:HEM201 4.2 6.2 0.2 C3C A:HEM201 4.2 7.4 0.2 C3D A:HEM201 4.2 5.4 0.2 C2B A:HEM201 4.2 5.8 0.8 C2D A:HEM201 4.2 4.8 0.2 C3B A:HEM201 4.2 6.3 0.8 C3A A:HEM201 4.3 5.7 0.8 C2C A:HEM201 4.3 5.2 0.8 C3C A:HEM201 4.3 4.4 0.8 C2A A:HEM201 4.3 5.5 0.8 C3D A:HEM201 4.3 4.7 0.8 C2D A:HEM201 4.4 4.4 0.8 CG2 A:VAL64 4.4 7.5 1.0 C3A A:HEM201 4.4 7.1 0.2 ND1 A:HIS89 4.4 6.8 1.0 C2A A:HEM201 4.4 5.3 0.2 CG A:HIS89 4.5 4.5 1.0 CE1 A:HIS60 4.7 7.6 1.0

V.S.De Serrano, M.M.Rodriguez, E.R.Schreiter. High Resolution Structures of Blackfin Tuna Myoglobin To Be Published.