Iron in PDB 3rhc: Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana

The structure of Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana, PDB code: 3rhc was solved by T.Roret, J.Couturier, P.Tsan, J.P.Jacquot, N.Rouhier, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.99 / 2.40
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	111.747, 111.747, 58.476, 90.00, 90.00, 120.00
R / Rfree (%)	18.9 / 23.8

The binding sites of Iron atom in the Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana (pdb code 3rhc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana, PDB code: 3rhc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe115 b:33.4 occ:1.00 FE1 A:FES115 0.0 33.4 1.0 S1 A:FES115 2.2 37.1 1.0 S2 A:FES115 2.2 33.9 1.0 SG2 A:GSH114 2.3 35.6 1.0 SG A:CYS29 2.4 37.8 1.0 FE2 A:FES115 2.7 35.3 1.0 CB2 A:GSH114 3.1 34.7 1.0 CB A:CYS29 3.4 35.2 1.0 CA A:CYS29 3.9 37.8 1.0 N B:SER30 4.1 34.6 1.0 N A:TYR31 4.1 41.0 1.0 CB A:TYR31 4.3 40.5 1.0 SG2 B:GSH114 4.4 42.8 1.0 C A:CYS29 4.4 38.7 1.0 N A:SER30 4.4 40.6 1.0 CA B:CYS29 4.5 35.2 1.0 CA2 A:GSH114 4.5 39.0 1.0 O A:HOH116 4.5 39.7 1.0 SG B:CYS29 4.6 39.1 1.0 CG A:TYR31 4.6 40.5 1.0 C B:CYS29 4.8 35.5 1.0 CB B:SER30 4.8 34.9 1.0 O B:TRP28 4.8 35.5 1.0 CA A:TYR31 4.9 39.6 1.0 OG B:SER30 4.9 40.4 1.0 CD2 A:TYR31 5.0 41.9 1.0

Iron binding site 2 out of 2 in the Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Holo Form of Glutaredoxin C5 From Arabidopsis Thaliana within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe115 b:35.3 occ:1.00 FE2 A:FES115 0.0 35.3 1.0 S2 A:FES115 2.2 33.9 1.0 S1 A:FES115 2.2 37.1 1.0 SG B:CYS29 2.3 39.1 1.0 SG2 B:GSH114 2.3 42.8 1.0 FE1 A:FES115 2.7 33.4 1.0 CB2 B:GSH114 3.2 41.7 1.0 CB B:CYS29 3.4 32.9 1.0 CA B:CYS29 3.7 35.2 1.0 N B:SER30 4.0 34.6 1.0 C B:CYS29 4.1 35.5 1.0 N B:TYR31 4.1 35.5 1.0 SG2 A:GSH114 4.3 35.6 1.0 CB B:TYR31 4.3 39.0 1.0 N A:SER30 4.5 40.6 1.0 CA A:CYS29 4.6 37.8 1.0 CA2 B:GSH114 4.6 45.9 1.0 CG B:TYR31 4.7 41.2 1.0 SG A:CYS29 4.7 37.8 1.0 CB A:SER30 4.8 41.1 1.0 CA B:TYR31 4.9 37.8 1.0 CB A:CYS29 4.9 35.2 1.0 CD2 B:TYR31 4.9 45.4 1.0 CA B:SER30 5.0 34.7 1.0 N2 B:GSH114 5.0 45.3 1.0 C B:SER30 5.0 35.2 1.0

J.Couturier, E.Stroher, A.N.Albetel, T.Roret, M.Muthuramalingam, L.Tarrago, T.Seidel, P.Tsan, J.P.Jacquot, M.K.Johnson, K.J.Dietz, C.Didierjean, N.Rouhier. Arabidopsis Chloroplastic Glutaredoxin C5 As A Model to Explore Molecular Determinants For Iron-Sulfur Cluster Binding Into Glutaredoxins. J.Biol.Chem. V. 286 27515 2011.
ISSN: ISSN 0021-9258
PubMed: 21632542
DOI: 10.1074/JBC.M111.228726