Iron in PDB 3rj6: Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant
Protein crystallography data
The structure of Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant, PDB code: 3rj6
was solved by
S.M.Smith,
A.C.Rosenzweig,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
61.78 /
1.23
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
28.341,
123.565,
34.986,
90.00,
89.73,
90.00
|
R / Rfree (%)
|
17.3 /
19.7
|
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant
(pdb code 3rj6). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant, PDB code: 3rj6:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 3rj6
Go back to
Iron Binding Sites List in 3rj6
Iron binding site 1 out
of 2 in the Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe154
b:6.8
occ:1.00
|
FE
|
A:HEM154
|
0.0
|
6.8
|
1.0
|
ND
|
A:HEM154
|
2.0
|
7.2
|
1.0
|
NE2
|
A:HIS93
|
2.0
|
7.4
|
1.0
|
NB
|
A:HEM154
|
2.0
|
6.4
|
1.0
|
O
|
A:HOH198
|
2.0
|
8.0
|
1.0
|
NC
|
A:HEM154
|
2.1
|
7.6
|
1.0
|
NA
|
A:HEM154
|
2.1
|
7.5
|
1.0
|
CE1
|
A:HIS93
|
3.0
|
8.1
|
1.0
|
C4D
|
A:HEM154
|
3.0
|
8.0
|
1.0
|
C1D
|
A:HEM154
|
3.0
|
7.4
|
1.0
|
C1A
|
A:HEM154
|
3.0
|
7.4
|
1.0
|
C4B
|
A:HEM154
|
3.0
|
6.8
|
1.0
|
C1C
|
A:HEM154
|
3.0
|
6.7
|
1.0
|
C1B
|
A:HEM154
|
3.1
|
6.6
|
1.0
|
CD2
|
A:HIS93
|
3.1
|
7.7
|
1.0
|
C4A
|
A:HEM154
|
3.1
|
7.1
|
1.0
|
C4C
|
A:HEM154
|
3.1
|
6.6
|
1.0
|
CHA
|
A:HEM154
|
3.4
|
7.4
|
1.0
|
CHD
|
A:HEM154
|
3.4
|
6.9
|
1.0
|
CHC
|
A:HEM154
|
3.4
|
6.9
|
1.0
|
CHB
|
A:HEM154
|
3.5
|
7.2
|
1.0
|
ND1
|
A:HIS93
|
4.2
|
8.3
|
1.0
|
CG
|
A:HIS93
|
4.2
|
7.8
|
1.0
|
C2A
|
A:HEM154
|
4.3
|
7.6
|
1.0
|
C2D
|
A:HEM154
|
4.3
|
8.5
|
1.0
|
C3C
|
A:HEM154
|
4.3
|
7.3
|
1.0
|
C3D
|
A:HEM154
|
4.3
|
8.0
|
1.0
|
C2C
|
A:HEM154
|
4.3
|
7.4
|
1.0
|
C3A
|
A:HEM154
|
4.3
|
7.6
|
1.0
|
C3B
|
A:HEM154
|
4.3
|
7.4
|
1.0
|
NE2
|
A:HIS64
|
4.3
|
7.5
|
1.0
|
C2B
|
A:HEM154
|
4.3
|
6.3
|
1.0
|
CG2
|
A:VAL68
|
4.7
|
7.7
|
1.0
|
CE1
|
A:HIS64
|
4.8
|
7.2
|
1.0
|
CZ
|
A:PHE43
|
4.9
|
9.3
|
1.0
|
|
Iron binding site 2 out
of 2 in 3rj6
Go back to
Iron Binding Sites List in 3rj6
Iron binding site 2 out
of 2 in the Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe154
b:5.9
occ:1.00
|
FE
|
B:HEM154
|
0.0
|
5.9
|
1.0
|
NE2
|
B:HIS93
|
2.0
|
5.9
|
1.0
|
NA
|
B:HEM154
|
2.0
|
5.7
|
1.0
|
NC
|
B:HEM154
|
2.0
|
6.2
|
1.0
|
O
|
B:HOH181
|
2.0
|
7.0
|
1.0
|
ND
|
B:HEM154
|
2.0
|
6.9
|
1.0
|
NB
|
B:HEM154
|
2.1
|
5.8
|
1.0
|
CE1
|
B:HIS93
|
3.0
|
6.8
|
1.0
|
C4D
|
B:HEM154
|
3.0
|
6.9
|
1.0
|
C4A
|
B:HEM154
|
3.0
|
5.6
|
1.0
|
C1C
|
B:HEM154
|
3.0
|
5.5
|
1.0
|
C1A
|
B:HEM154
|
3.0
|
6.1
|
1.0
|
CD2
|
B:HIS93
|
3.0
|
6.0
|
1.0
|
C4C
|
B:HEM154
|
3.0
|
5.7
|
1.0
|
C1D
|
B:HEM154
|
3.1
|
7.0
|
1.0
|
C1B
|
B:HEM154
|
3.1
|
5.8
|
1.0
|
C4B
|
B:HEM154
|
3.1
|
6.0
|
1.0
|
CHA
|
B:HEM154
|
3.4
|
6.3
|
1.0
|
CHD
|
B:HEM154
|
3.4
|
6.0
|
1.0
|
CHB
|
B:HEM154
|
3.4
|
6.3
|
1.0
|
CHC
|
B:HEM154
|
3.4
|
6.1
|
1.0
|
ND1
|
B:HIS93
|
4.2
|
7.5
|
1.0
|
CG
|
B:HIS93
|
4.2
|
6.4
|
1.0
|
C2A
|
B:HEM154
|
4.2
|
5.7
|
1.0
|
C3C
|
B:HEM154
|
4.3
|
6.0
|
1.0
|
C3D
|
B:HEM154
|
4.3
|
7.4
|
1.0
|
C3A
|
B:HEM154
|
4.3
|
6.1
|
1.0
|
NE2
|
B:HIS64
|
4.3
|
7.2
|
1.0
|
C2D
|
B:HEM154
|
4.3
|
6.8
|
1.0
|
C2C
|
B:HEM154
|
4.3
|
6.4
|
1.0
|
C3B
|
B:HEM154
|
4.3
|
6.5
|
1.0
|
C2B
|
B:HEM154
|
4.3
|
6.3
|
1.0
|
CG2
|
B:VAL68
|
4.7
|
6.8
|
1.0
|
CE1
|
B:HIS64
|
4.8
|
7.0
|
1.0
|
CZ
|
B:PHE43
|
4.9
|
9.7
|
1.0
|
|
Reference:
A.K.Knutson,
S.M.Smith,
A.C.Rosenzweig,
B.M.Hoffman.
Crystal Structure of Horse Heart Ferric Myoglobin; K45E/K63E/K96E Mutant To Be Published.
Page generated: Sun Aug 4 19:19:37 2024
|